salbrec / seqQscorerLinks
☆22Updated last month
Alternatives and similar repositories for seqQscorer
Users that are interested in seqQscorer are comparing it to the libraries listed below
Sorting:
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- Accompanying analysis code for the FRASER manuscript☆26Updated 5 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 3 years ago
- Comprehensive and scalable differential splicing analyses☆17Updated 7 months ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- Comprehensive Human Expressed SequenceS☆18Updated 3 months ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 7 years ago
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆12Updated 5 years ago
- Winter 2021, GGG 298 - Tools for Data Intensive Research - UC Davis☆12Updated 4 years ago
- ☆12Updated last year
- ☆20Updated 5 months ago
- Explore the cancer relevance of your gene list☆52Updated last month
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆14Updated 5 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- ☆22Updated 8 months ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆18Updated last month
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆15Updated 6 years ago
- simplified cellranger for long-read data☆19Updated 2 months ago
- Detecting somatic mutations and predicting tumor-specific neo-antigens☆29Updated 4 years ago
- Toolkit for benchmarking fusion transcript predictions☆19Updated last year
- A comprehensive gene set function enrichment tool for multiple species.☆14Updated 5 years ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆26Updated last year
- A Nextflow Genome-Wide Association Study (GWAS) Pipeline☆35Updated 4 months ago
- ☆17Updated last year
- Workflow for Sequenza, cellularity and ploidy☆22Updated 2 months ago
- Benchmarking long-read RNA-seq analysis tools☆27Updated 8 months ago
- ☆23Updated 4 years ago
- Repo that aids in the detection of microsatellite instabilities (MSI) from sequencing data☆20Updated last year
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year