detection of mutations causing splicing change
☆13Oct 6, 2022Updated 3 years ago
Alternatives and similar repositories for SAVNet
Users that are interested in SAVNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- structure detection program☆18Nov 20, 2024Updated last year
- paplot creates various dynamic and interactive reports for cancer genome analysis.☆26Feb 1, 2023Updated 3 years ago
- Generate an enhanced VCF files from ClinVar XML Full releases☆16Feb 23, 2026Updated 3 months ago
- CircSplice☆11Feb 27, 2019Updated 7 years ago
- SV detection tool for nanopore sequence reads☆97Mar 25, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Linear-time, low-memory construction of variation graphs☆20Feb 3, 2020Updated 6 years ago
- The user can generate Molecular Tumor Board reports for TCGA samples☆15Mar 21, 2020Updated 6 years ago
- Implicit Interval Tree with Interpolation Index☆42Jul 13, 2022Updated 3 years ago
- ☆15Jan 19, 2018Updated 8 years ago
- pybio is a comprehensive Python framework designed to streamline genomics operations. It offers a direct interface to Ensembl genome asse…☆15Oct 28, 2025Updated 7 months ago
- Deep learning based prediction of IsoForm FUnctions from Sequences and Expression☆15Jul 28, 2025Updated 10 months ago
- A computational workflow for exitron splicing identification☆16Aug 30, 2024Updated last year
- mitochondrial variant analysis tools☆15Mar 4, 2021Updated 5 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Aug 9, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- What's The Function of these genes?☆22Mar 17, 2017Updated 9 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Dec 8, 2017Updated 8 years ago
- AC-DIAMOND is a DNA-protein alignment tool☆17Oct 11, 2023Updated 2 years ago
- Variant Alert!, a framework to monitor every significant alteration in variant classification and gene-disease association between two ve…☆14Jul 19, 2021Updated 4 years ago
- K-means clustering for large single-cell datasets☆13Feb 10, 2026Updated 4 months ago
- Junction Based Analysis of Splicing Events for RNA-Seq☆34Apr 3, 2026Updated 2 months ago
- Software for creating and comparing genome fingerprints.☆11Jun 30, 2024Updated last year
- for detecting internal tandem duplication from genome sequence data.☆12May 16, 2019Updated 7 years ago
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Oct 11, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆15Sep 26, 2019Updated 6 years ago
- Non-parametric structural variant genotyper☆15Nov 18, 2021Updated 4 years ago
- ☆24Apr 15, 2024Updated 2 years ago
- Rust wrapper for STAR aligner☆21Apr 13, 2026Updated 2 months ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆45May 1, 2026Updated last month
- libstrbuf: A powerful string library for C☆17Oct 15, 2016Updated 9 years ago
- Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.☆15Dec 16, 2019Updated 6 years ago
- A Transcriptomics-Proteomics Integration Pipeline☆21Apr 11, 2024Updated 2 years ago
- High-level API for storing and querying sequence variant data☆20May 24, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Published at Bioinformatics☆12Jul 4, 2024Updated last year
- The full training script for Enformer - Tensorflow Sonnet☆18Apr 18, 2022Updated 4 years ago
- Tumour-only somatic mutation calling using long reads☆28Oct 28, 2024Updated last year
- ☆29Feb 17, 2021Updated 5 years ago
- Yet Another CWL Engine by Golang☆18Mar 19, 2019Updated 7 years ago
- Numerical Encoding for Human Genetic Variants☆42Jun 8, 2023Updated 3 years ago
- A simple observation count database☆11Jan 13, 2026Updated 5 months ago