detection of mutations causing splicing change
☆13Oct 6, 2022Updated 3 years ago
Alternatives and similar repositories for SAVNet
Users that are interested in SAVNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- structure detection program☆18Nov 20, 2024Updated last year
- Generate an enhanced VCF files from ClinVar XML Full releases☆17Updated this week
- CircSplice☆11Feb 27, 2019Updated 7 years ago
- SV detection tool for nanopore sequence reads☆97Mar 25, 2026Updated 3 months ago
- Hands-on workshop on NGS data analysis @ NARO☆11Oct 24, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Linear-time, low-memory construction of variation graphs☆20Feb 3, 2020Updated 6 years ago
- The user can generate Molecular Tumor Board reports for TCGA samples☆15Mar 21, 2020Updated 6 years ago
- ☆15Jan 19, 2018Updated 8 years ago
- A computational workflow for exitron splicing identification☆16Jul 17, 2026Updated last week
- Implicit Interval Tree with Interpolation Index☆43Jul 13, 2022Updated 4 years ago
- an empirical Bayesian framework for mutation detection from cancer genome sequencing data☆31Apr 5, 2016Updated 10 years ago
- pybio is a comprehensive Python framework designed to streamline genomics operations. It offers a direct interface to Ensembl genome asse…☆15Jul 11, 2026Updated last week
- Deep learning based prediction of IsoForm FUnctions from Sequences and Expression☆15Jul 28, 2025Updated 11 months ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Aug 9, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- mitochondrial variant analysis tools☆15Mar 4, 2021Updated 5 years ago
- K-means clustering for large single-cell datasets☆13Feb 10, 2026Updated 5 months ago
- What's The Function of these genes?☆22Mar 17, 2017Updated 9 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Dec 8, 2017Updated 8 years ago
- Rapid competitive read demulitplexer. Made with tries.☆23May 19, 2025Updated last year
- Variant Alert!, a framework to monitor every significant alteration in variant classification and gene-disease association between two ve…☆14Jul 19, 2021Updated 5 years ago
- AC-DIAMOND is a DNA-protein alignment tool☆17Oct 11, 2023Updated 2 years ago
- Junction Based Analysis of Splicing Events for RNA-Seq☆35Apr 3, 2026Updated 3 months ago
- Software for creating and comparing genome fingerprints.☆11Jun 30, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- for detecting internal tandem duplication from genome sequence data.☆12May 16, 2019Updated 7 years ago
- ☆14Sep 26, 2019Updated 6 years ago
- ☆24Apr 15, 2024Updated 2 years ago
- Rust wrapper for STAR aligner☆22Apr 13, 2026Updated 3 months ago
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Oct 11, 2018Updated 7 years ago
- Non-parametric structural variant genotyper☆15Nov 18, 2021Updated 4 years ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46May 1, 2026Updated 2 months ago
- libstrbuf: A powerful string library for C☆17Oct 15, 2016Updated 9 years ago
- Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.☆15Dec 16, 2019Updated 6 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- High-level API for storing and querying sequence variant data☆20May 24, 2019Updated 7 years ago
- Tumour-only somatic mutation calling using long reads☆29Oct 28, 2024Updated last year
- Published at Bioinformatics☆12Jul 4, 2024Updated 2 years ago
- Yet Another CWL Engine by Golang☆18Mar 19, 2019Updated 7 years ago
- A simple observation count database☆11Jan 13, 2026Updated 6 months ago
- Read CRAM v3 and v2 in node or in the browser☆18Jul 1, 2026Updated 3 weeks ago
- The full training script for Enformer - Tensorflow Sonnet☆18Apr 18, 2022Updated 4 years ago