ekg / hhga
haplotypes genotypes and alleles example decision synthesizer
☆20Updated 5 years ago
Alternatives and similar repositories for hhga:
Users that are interested in hhga are comparing it to the libraries listed below
- ☆37Updated 4 years ago
- Estimate linkage disequilibrium between unphased loci☆11Updated 9 years ago
- Novel Adjacency Identification with Barcoded Reads☆13Updated 3 years ago
- Lacer: Accurate Base Quality Score Recalibration using Linear Algebra☆8Updated 3 years ago
- HGVS variant description extractor☆11Updated 4 years ago
- RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.☆14Updated 6 years ago
- comb aligner -- a graphical nucleotide sequence alignment tool☆9Updated 8 years ago
- Detects human contamination in bam files☆16Updated 4 years ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Updated 2 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆33Updated 4 months ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- C++ library for analysing and storing large-scale cohorts of sequence variant data☆17Updated 5 years ago
- Mapping-free variant caller for short-read Illumina data☆19Updated 5 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Updated 9 years ago
- python wrapper to dpryan79's bigwig library using cffi☆19Updated 8 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 3 years ago
- pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)☆49Updated 8 years ago
- Using reference-free compressed data structures to analyse thousands of human genomes (1000 Genomes ReadServer)☆14Updated 7 years ago
- Accurate and fast taxonomic classification using pseudoaligning☆21Updated 7 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 2 months ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 5 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- Integrated Variant Caller☆17Updated 7 years ago
- Population-scale detection of novel sequence insertions☆27Updated 2 years ago
- Hidden Markov Model based Copy number caller☆20Updated 5 months ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 5 years ago
- EXPERIMENTAL implementation of side graph☆10Updated 10 years ago
- ☆21Updated last week
- Numerical Encoding for Human Genetic Variants☆41Updated last year