Ancestry and Kinship Tools
☆70Apr 20, 2026Updated 2 weeks ago
Alternatives and similar repositories for akt
Users that are interested in akt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SEEKIN: SEquence-based Estimation of KINship☆14Oct 11, 2017Updated 8 years ago
- ☆11Jun 26, 2020Updated 5 years ago
- genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF☆149Feb 17, 2026Updated 2 months ago
- C++ library for analysing and storing large-scale cohorts of sequence variant data☆17Aug 27, 2019Updated 6 years ago
- Module for analysing admixture graphs☆28Apr 30, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files☆37Nov 19, 2019Updated 6 years ago
- A utility for merging and genotyping Illumina-style GVCFs.☆33Feb 26, 2019Updated 7 years ago
- Flexible genotype query among 30,000+ samples whole-genome☆94Sep 4, 2019Updated 6 years ago
- Smart VCF parser DSL☆83May 24, 2022Updated 3 years ago
- A software for discovery, genotyping and characterization of structural variants☆22Sep 11, 2024Updated last year
- Variant caller GUI + genetic disease analysis☆22Apr 29, 2020Updated 6 years ago
- Structural variant merging tool☆57Aug 23, 2024Updated last year
- De novo assembly based variant calling pipeline for Illumina short reads☆110Nov 30, 2020Updated 5 years ago
- Segmented HAPlotype Estimation and Imputation Tool☆99Aug 28, 2023Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Scalable gVCF merging and joint variant calling for population sequencing projects☆183Apr 12, 2024Updated 2 years ago
- haplotypes genotypes and alleles example decision synthesizer☆20Jun 13, 2019Updated 6 years ago
- A genotype query interface.☆136Mar 29, 2021Updated 5 years ago
- BAM Statistics, Feature Counting and Annotation☆154Apr 16, 2026Updated 3 weeks ago
- Read visualizer for structural variants☆84Aug 18, 2018Updated 7 years ago
- Genome inference from a population reference graph☆96Apr 1, 2025Updated last year
- Process Illumina instrument data into SAM/BAM/CRAM files.☆10Mar 9, 2026Updated 2 months ago
- Canvas - Copy number variant (CNV) calling from DNA sequencing data☆129Apr 20, 2026Updated 2 weeks ago
- find large indels (in the blind spot between GATK/freebayes and SV callers)☆39Dec 3, 2017Updated 8 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Filtering and profiling of next-generational sequencing data using region-specific rules☆79Oct 30, 2023Updated 2 years ago
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Apr 23, 2019Updated 7 years ago
- Unfazed by genomic variant phasing☆27May 26, 2024Updated last year
- annotate a VCF with other VCFs/BEDs/tabixed files☆401May 1, 2026Updated last week
- Microassembly based somatic variant caller for NGS data☆154Jun 23, 2022Updated 3 years ago
- Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.☆15Dec 16, 2019Updated 6 years ago
- Processing WGS aDNA data using the ReichLab protocol☆13Mar 8, 2019Updated 7 years ago
- Tools for early stage alignment file processing☆96Mar 12, 2019Updated 7 years ago
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆19Mar 10, 2018Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Hemang Parikh☆11Jan 12, 2016Updated 10 years ago
- seqcover allows users to view coverage for hundreds of genes and dozens of samples☆51Apr 9, 2021Updated 5 years ago
- Bayesian haplotype-based mutation calling☆323Feb 13, 2026Updated 2 months ago
- This repo is deprecated. Please use gfatools instead.☆15Aug 17, 2018Updated 7 years ago
- ☆16Aug 8, 2025Updated 9 months ago
- Haplotype phasing software☆70Dec 5, 2020Updated 5 years ago
- Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data☆178Aug 22, 2024Updated last year