Alternatives and similar repositories for Demultiplexing_Doublet_Detecting_Docs:

Users that are interested in Demultiplexing_Doublet_Detecting_Docs are comparing it to the libraries listed below

• rpolicastro / scProportionTest
  ☆61Updated last year
• elimereu / matchSCore2
  ☆53Updated 4 years ago
• EDePasquale / DoubletDecon
  A tool for removing doublets from single-cell RNA-seq data
  ☆73Updated 4 years ago
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆62Updated 5 months ago
• tgen / banovichlab
  Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).
  ☆44Updated last year
• jlaffy / infercna
  Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data
  ☆35Updated last year
• haniffalab / scRNA-seq_analysis
  Single cell RNA-seq analysis bundle
  ☆34Updated 5 years ago
• chris-mcginnis-ucsf / MULTI-seq
  R implementation of MULTI-seq sample classification workflow
  ☆61Updated last year
• FelixTheStudent / cellpypes
  Cell type pipes for R
  ☆51Updated last year
• GfellerLab / SuperCell
  Coarse-graining of large single-cell RNA-seq data into metacells
  ☆75Updated 7 months ago
• MarioniLab / miloDE
  Framework for sensitive DE testing (using neighbourhoods)
  ☆64Updated 8 months ago
• wmacnair / SampleQC
  Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data
  ☆37Updated 2 years ago
• Qile0317 / APackOfTheClones
  Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of …
  ☆15Updated 4 months ago
• jon-xu / scSplit
  Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…
  ☆42Updated 2 years ago
• niaid / dsb
  Normalize CITEseq Data
  ☆65Updated 9 months ago
• sridnona / cb_sniffer
  mutation(barcode) caller for 10x single cell data
  ☆44Updated 4 years ago
• Coolgenome / iTALK
  ☆59Updated 5 years ago
• xmc811 / Scillus
  R Package for Single-Cell Dataset Processing and Visualization
  ☆61Updated 3 years ago
• cssmillie / ulcerative_colitis
  ☆60Updated 4 years ago
• HaojiaWu / plot1cell
  A R package for advanced single cell data viz
  ☆66Updated last year
• ycl6 / StackedVlnPlot
  Create stacked violin plot
  ☆46Updated 3 years ago
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆48Updated last year
• scCOVID-19 / COVIDPBMC
  Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection
  ☆40Updated 3 years ago
• supatt-lab / SingCellaR
  an integrative analysis tool for analysing large-scale single cell RNA-sequencing data
  ☆33Updated last year
• CFeregrino / scWGCNA
  scWGCNA
  ☆58Updated 2 years ago
• Single-Cell-Genomics-Group-CNAG-CRG / Tumor-Immune-Cell-Atlas
  Code repository for the Tumor Immune Cell Atlas (TICA) project
  ☆62Updated 2 years ago
• atakanekiz / CIPR-Package
  Cluster Identity Predictor (R package implementation)
  ☆20Updated 3 years ago
• aertslab / popscle_helper_tools
  Helper tools for popscle
  ☆20Updated last year
• HetzDra / turboGliph
  R implementation of GLIPH (Grouping of Lymphocyte Interactions by Paratope Hotspots), an algorithm developed by Glanville et al to identi…
  ☆19Updated 2 years ago
• Japrin / sscClust
  simpler single cell RNAseq data clustering
  ☆40Updated last month