☆19Jun 5, 2024Updated last year
Alternatives and similar repositories for Demultiplexing_Doublet_Detecting_Docs
Users that are interested in Demultiplexing_Doublet_Detecting_Docs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Helper tools for popscle☆21Apr 21, 2023Updated 3 years ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆58May 5, 2021Updated 4 years ago
- This package removes unwanted variation from raw sequencing count data using Negative Binomial and/or Zero Inflated Negative Binomial mod…☆18Jun 13, 2024Updated last year
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated last year
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆42Feb 8, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆41Nov 18, 2021Updated 4 years ago
- a tool for annotation of immunoglobulin genes in genome assemblies☆14Sep 22, 2025Updated 7 months ago
- Comparison of dimensionality reduction methods☆30Mar 24, 2020Updated 6 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆50Sep 18, 2025Updated 7 months ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 3 years ago
- ☆18Oct 17, 2023Updated 2 years ago
- VoxHunt: Resolving human brain organoid heterogeneity through single-cell genomic comparison to spatial brain maps☆48Mar 1, 2024Updated 2 years ago
- Instructions and analysis scripts for single cell Higher Order Testing (scHOT)☆10Oct 7, 2020Updated 5 years ago
- Analysis for 2019 submission "Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis" Schaffli…☆22Jun 17, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆19Mar 12, 2024Updated 2 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆40Mar 21, 2026Updated last month
- ☆55Nov 28, 2025Updated 5 months ago
- ☆59Jan 2, 2024Updated 2 years ago
- Fast, accurate and scalable normalization for RNA sequencing data with the RUVprps software package.☆14Feb 23, 2026Updated 2 months ago
- GREAT algorithm in Python☆15Oct 24, 2022Updated 3 years ago
- scRNA-seq Shiny App☆14May 1, 2023Updated 2 years ago
- ☆13Dec 14, 2023Updated 2 years ago
- Bead-based single-cell atac processing☆33Nov 13, 2021Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Experiments to run single cell analyses efficiently at scale using Zarr, anndata, Scanpy, and Apache Spark☆15Mar 28, 2019Updated 7 years ago
- Genetic multiplexing of barcoded single cell RNA-seq☆134Jul 1, 2024Updated last year
- deconvolution for RNAseq and bisulfite sequencing☆12Aug 17, 2020Updated 5 years ago
- Renders SVG schema of SARS-CoV-2 clade as defined by Nextstrain☆18Nov 24, 2025Updated 5 months ago
- ☆19Mar 11, 2024Updated 2 years ago
- This repository contains HCA Benchmarking codes☆26Nov 11, 2019Updated 6 years ago
- BACNET is a Java based platform to develop website for multi-omics analysis☆13Feb 16, 2026Updated 2 months ago
- Finding gene expression states in scRNA-seq data☆51Mar 22, 2024Updated 2 years ago
- GENome Organisation Visual Analytics☆16Dec 24, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆10May 14, 2025Updated 11 months ago
- Repository for useR! 2021 TileDB Tutorial Helper Package☆12Aug 4, 2021Updated 4 years ago
- Central repository for the Multiplexed Tissue Imaging Workshop 2023.☆10Jan 9, 2023Updated 3 years ago
- Clustering scRNAseq by genotypes☆204Apr 14, 2026Updated 2 weeks ago
- ☆17Dec 7, 2023Updated 2 years ago
- Basics of the OSCA book☆15Sep 29, 2025Updated 7 months ago
- Shiny Interactive Web Apps for Single-Cell Data☆208Apr 24, 2025Updated last year