drneavin / Demultiplexing_Doublet_Detecting_DocsLinks
☆19Updated last year
Alternatives and similar repositories for Demultiplexing_Doublet_Detecting_Docs
Users that are interested in Demultiplexing_Doublet_Detecting_Docs are comparing it to the libraries listed below
Sorting:
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated 5 months ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆86Updated last week
- Normalize CITEseq Data☆66Updated last month
- ☆44Updated 2 weeks ago
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 5 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆91Updated 6 months ago
- Framework for sensitive DE testing (using neighbourhoods)☆75Updated last month
- Cell type pipes for R☆52Updated last year
- R package for semi-supervised single-cell data integration☆91Updated 4 months ago
- Generate masks for scRNA-seq clusters on t-SNE or UMAP plots☆39Updated 3 weeks ago
- An R toolkit for estimation of cell composition from bulk expression data☆80Updated 6 months ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated 2 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- R implementation of MULTI-seq sample classification workflow☆64Updated 2 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- R package for robust clustering of single cell RNA sequencing data☆36Updated last year
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆43Updated 3 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆53Updated 2 years ago
- ☆73Updated 2 years ago
- marker-based purification of cell types from single-cell RNA-seq datasets☆131Updated 4 months ago
- Latent Embedding Multivariate Regression☆97Updated last year
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆93Updated 11 months ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆45Updated last year
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆58Updated 4 years ago
- Single Cell Cluster Evaluation☆98Updated 4 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆40Updated 4 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 5 years ago
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 7 months ago
- Analysis of cell-cell communication at single-cell resolution☆105Updated last year