showteeth / GEfetch2RLinks
GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools
☆37Updated 5 months ago
Alternatives and similar repositories for GEfetch2R
Users that are interested in GEfetch2R are comparing it to the libraries listed below
Sorting:
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated last month
- Code to reproduce TNBC analysis and figures☆24Updated 3 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆22Updated 4 years ago
- ☆48Updated last year
- ☆37Updated last year
- An R package for visualising cell-cell interactions☆43Updated last year
- ☆15Updated 4 years ago
- R package for Flexible dot plots☆29Updated 3 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 11 months ago
- XEnograft Visualization & Analysis☆11Updated last month
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Updated last year
- ☆20Updated 5 months ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated 2 months ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago
- ☆23Updated last year
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆20Updated 2 months ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Updated 2 years ago
- Tools for assessing clustering robustness☆25Updated 3 weeks ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Pseudotime Analysis for Bulk Data☆17Updated last year
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆31Updated 2 years ago
- ☆12Updated last year
- ☆17Updated 2 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago