showteeth / GEfetch2RLinks
GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools
☆36Updated 3 months ago
Alternatives and similar repositories for GEfetch2R
Users that are interested in GEfetch2R are comparing it to the libraries listed below
Sorting:
- An R package for visualising cell-cell interactions☆44Updated 11 months ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆36Updated last week
- Tools for assessing clustering robustness☆25Updated this week
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated last month
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 3 months ago
- ☆56Updated last year
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- ☆47Updated last year
- ☆41Updated 4 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆52Updated 2 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- ☆15Updated 3 years ago
- Code to reproduce TNBC analysis and figures☆24Updated 3 years ago
- R package for analysing single cell data☆56Updated 2 years ago
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 8 months ago
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆19Updated last week
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- ☆29Updated 7 years ago
- ☆36Updated 11 months ago
- R package for Flexible dot plots☆29Updated 3 years ago
- ☆12Updated last year
- Genetic Heterogeneity Profiling by Single Cell RNA Sequencing☆35Updated 5 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- ☆21Updated 3 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- Trans-association between HLA and TCR-CDR3☆17Updated 2 years ago
- MarcoPolo is a clustering-free approach to the exploration of bimodally expressed genes along with group information in single-cell RNA-s…☆20Updated 7 months ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago