Helper tools for popscle
☆21Apr 21, 2023Updated 2 years ago
Alternatives and similar repositories for popscle_helper_tools
Users that are interested in popscle_helper_tools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Jun 5, 2024Updated last year
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆58May 5, 2021Updated 4 years ago
- ☆12May 21, 2025Updated 10 months ago
- Clone of the Bioconductor repository for the scater package.☆95Jan 12, 2026Updated 2 months ago
- ☆11Mar 8, 2026Updated last month
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Cool Bioinformatics Scripts☆12May 21, 2024Updated last year
- ☆22Apr 6, 2018Updated 8 years ago
- Tools for correcting single cell barcodes for various scATAC-seq techniques and creating fragment files and spltting BAM files per cluste…☆29Apr 1, 2026Updated last week
- ☆11Jun 26, 2020Updated 5 years ago
- Genetic multiplexing of barcoded single cell RNA-seq☆133Jul 1, 2024Updated last year
- ☆22May 6, 2022Updated 3 years ago
- GFF3 format with miRNA and isomiR information from sequencing data☆16Aug 5, 2019Updated 6 years ago
- Course in population genomics at BiRC☆12Mar 18, 2026Updated 3 weeks ago
- This repo contains tutorials for different NGS analysis methods☆13Nov 29, 2021Updated 4 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- R package for the inference of cell fate bias from single-cell RNA-seq data.☆22Jun 14, 2022Updated 3 years ago
- ☆53Nov 28, 2025Updated 4 months ago
- ClusterMap is an R package to analyze and compare two or more single cell expression datasets.☆20Jan 17, 2023Updated 3 years ago
- Clustering scRNAseq by genotypes☆200Apr 2, 2026Updated last week
- Experiments to run single cell analyses efficiently at scale using Zarr, anndata, Scanpy, and Apache Spark☆15Mar 28, 2019Updated 7 years ago
- Workflows and analysis of scRNA-seq of Olfactory Projection Neurons for Li, Horns et al. (2017)☆21Aug 17, 2017Updated 8 years ago
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"☆24Dec 20, 2018Updated 7 years ago
- deconvolution for RNAseq and bisulfite sequencing☆11Aug 17, 2020Updated 5 years ago
- An R package for feature selection in topological spaces.☆10Aug 12, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Finding gene expression states in scRNA-seq data☆50Mar 22, 2024Updated 2 years ago
- Mapping-free variant caller for short-read Illumina data☆20Apr 2, 2020Updated 6 years ago
- Statistical and computational analysis of the human genome☆15Sep 22, 2021Updated 4 years ago
- Central repository for the Multiplexed Tissue Imaging Workshop 2023.☆10Jan 9, 2023Updated 3 years ago
- Weighted Nearest Neighbors Analysis implemented in Python (pyWNN)☆20Oct 7, 2021Updated 4 years ago
- This repository contains all containers that WARP uses.☆13Apr 2, 2026Updated last week
- ☆17Dec 7, 2023Updated 2 years ago
- Scripts for gathering SLURM statistics☆23Oct 6, 2018Updated 7 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆13May 2, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- A program that can help you solve any Rubik's Cube using Fredrich CFOP Algorithms.☆15Sep 29, 2019Updated 6 years ago
- Gene regulatory network reconstruction from pseudotemporal single-cell gene expression data☆11Jul 11, 2024Updated last year
- Codes for our paper "Single-Cell RNA-Seq Reveals Dynamic Early Embryonic-like Programs during Chemical Reprogramming" published by Cell S…☆11Sep 5, 2020Updated 5 years ago
- A new extended cell deconvolution for peripheral blood☆18Feb 28, 2025Updated last year
- Kinship In Mixed Model Analysis of RNA-seq☆15Apr 14, 2025Updated 11 months ago
- Repository for the code assignment of the Deep Learning 1 course, Fall 2021 edition☆10Oct 31, 2022Updated 3 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆33Nov 28, 2025Updated 4 months ago