Alternatives and similar repositories for bacnet

Users that are interested in bacnet are comparing it to the libraries listed below

• Oshlack / MINTIE
  Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
  ☆37Updated last year
• comprna / ORQAS
  ORF Quantification pipeline for Alternative Splicing
  ☆16Updated 4 years ago
• CalabreseLab / seekr
  A library for counting small kmer frequencies in nucleotide sequences.
  ☆28Updated last year
• drostlab / myTAI
  Evolutionary Transcriptomics with R
  ☆49Updated last month
• apcamargo / tspex
  tspex: tissue-specificity calculator
  ☆36Updated 2 years ago
• mrcuizhe / interacCircos
  An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot
  ☆28Updated 3 years ago
• pachterlab / splitcode
  Flexible and efficient parsing, interpreting and editing of sequencing reads
  ☆44Updated last week
• wyguo / ThreeDRNAseq
  A pipeline for differential expression and differential alternative splicing analysis
  ☆67Updated last year
• LosicLab / starchip
  Detection of Circular RNA and Fusions from RNA-Seq
  ☆32Updated 7 years ago
• cccnrc / plot-VCF
  visual analysis of your VCF files
  ☆38Updated 3 years ago
• EI-CoreBioinformatics / portcullis
  Splice junction analysis and filtering from BAM files
  ☆42Updated 3 years ago
• datapplab / pathview
  pathway based data integration and visualization
  ☆42Updated 8 months ago
• AngelCampos / txtools
  An R package to process and analyze transcriptomic data
  ☆18Updated 6 months ago
• 123xiaochen / VCFshiny
  ☆29Updated last year
• adnaniazi / tailfindr
  An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.
  ☆55Updated last year
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 4 years ago
• JSB-UCLA / Clipper
  A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions
  ☆40Updated 3 years ago
• SouthGreenPlatform / PyRice
  PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …
  ☆12Updated last year
• s4hts / HTStream
  A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes
  ☆51Updated 11 months ago
• YaoLab-Bioinfo / intansv
  Integrative analysis of structural variations.
  ☆40Updated 2 years ago
• zd1 / telseq
  A software for calculating telomere length
  ☆72Updated 7 years ago
• guigolab / bamstats
  A command line tool to compute mapping statistics from a BAM file
  ☆25Updated 3 years ago
• schatzlab / scikit-ribo
  Accurate estimation and robust modelling of translation dynamics at codon resolution
  ☆21Updated 8 years ago
• ulelab / ultraplex
  Ultra-fast 5' and 3' demultiplexer
  ☆28Updated last year
• andreasmock / MetaboDiff
  ☆33Updated 5 years ago
• Kumquatum / GWENA
  Gene Co-expression Network analysis pipeline
  ☆25Updated 2 years ago
• pinellolab / AmpUMI
  Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)
  ☆41Updated 3 months ago
• kevinblighe / ClinicalGradeDNAseq
  Automated next generation DNA sequencing analysis pipeline suited for clinical tests, with >99.9% sensitivity to Sanger sequencing at rea…
  ☆26Updated 5 years ago
• TimoLassmann / samstat
  SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.
  ☆24Updated 2 years ago
• luciorq / isoformic
  Isoform-level functional RNA-Seq analysis 🧬
  ☆35Updated last month