huwenboshi / s-ldxrLinks
Stratified squared trans-ethnic genetic correlation
☆14Updated 3 years ago
Alternatives and similar repositories for s-ldxr
Users that are interested in s-ldxr are comparing it to the libraries listed below
Sorting:
- Fine-mapping method only using summary statistics☆20Updated 9 years ago
- ☆19Updated 4 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- Older repo for MRLocus. See new website for software usage guide:☆15Updated 2 years ago
- ☆35Updated 2 years ago
- Estimate genetic correlation using predicted expression☆23Updated 7 years ago
- Workflow for performing cistrome-wide associations studies☆10Updated 3 years ago
- Mediated Expression Score Regression (MESC)☆26Updated last month
- An R package for creating ggplot2 based miami plots.☆18Updated 9 months ago
- GENI plots to visualise results from genome-wide association studies☆30Updated last year
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆19Updated 2 years ago
- Software to infer latent pleiotropic components from GWAS summary data☆15Updated 10 months ago
- Code and simulations using interaction-LD score regression☆13Updated last year
- ☆22Updated 2 months ago
- Leveraging functional information to improve GWAS summary statistic imputation☆19Updated 4 years ago
- We design a method for heritability estimation, namely LD Eigenvalue Regression (LDER), which extends the LDSC method and provides more a…☆13Updated 3 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆35Updated 5 years ago
- Tool for predicting TWAS features (e.g. gene expression) in a target sample☆16Updated 5 months ago
- ☆13Updated 2 years ago
- Create Regional Association Plots☆12Updated 3 months ago
- Integration of TWAS and Colocalization Analysis☆17Updated last year
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Updated 4 months ago
- ☆23Updated 4 months ago
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆29Updated 2 years ago
- GWAS genetics Fine-mapping method☆26Updated last year
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆20Updated 3 months ago
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆16Updated 2 months ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated 2 years ago
- Colocalization analysis of genetic association signals☆53Updated 5 months ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Updated 6 years ago