boxiangliu / locuscompareLinks
LocusCompare is an interactive visualization tool for comparing two genetic association datasets.
☆21Updated 2 years ago
Alternatives and similar repositories for locuscompare
Users that are interested in locuscompare are comparing it to the libraries listed below
Sorting:
- An R package for generating comparative regional association plots☆18Updated 5 months ago
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago
- ☆32Updated last year
- ☆21Updated 2 months ago
- Code for implementing Mendelian randomization investigations☆17Updated 9 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆23Updated 5 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 11 months ago
- ☆20Updated 11 months ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated 2 years ago
- ☆18Updated 7 years ago
- Pairwise Hierarchical Model☆18Updated 3 years ago
- Regional association plots☆25Updated last year
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆18Updated 2 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 2 years ago
- Primo☆16Updated 3 years ago
- Multi-Omic Strategies for TWAS☆13Updated 2 years ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- PredictDB Pipeline for GTEx v7 data☆17Updated 2 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- haploR: utilities for mining Haploreg and other similar web-based tools☆9Updated last year
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 3 years ago
- GWAS genetics Fine-mapping method☆23Updated 7 months ago
- GENI plots to visualise results from genome-wide association studies☆27Updated 7 months ago
- Upgrade to coloc☆13Updated 6 years ago
- ☆22Updated 4 months ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Updated 5 years ago
- causal TWAS (cTWAS)☆43Updated last week
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago
- Create Regional Association Plots☆11Updated 10 months ago