Single cell Type Enrichment Analysis for Phenotypes (STEAP)
☆14Jun 16, 2021Updated 4 years ago
Alternatives and similar repositories for STEAP
Users that are interested in STEAP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆19Mar 30, 2021Updated 5 years ago
- CELLECT (CELL-type Expression-specific integration for Complex Traits)☆98Aug 16, 2024Updated last year
- BWMR (Bayesian Weighted Mendelian Randomization)☆22Jun 14, 2023Updated 2 years ago
- Tool for predicting TWAS features (e.g. gene expression) in a target sample☆17Jun 24, 2025Updated 10 months ago
- CELLEX (CELL-type EXpression-specificity)☆44Apr 29, 2026Updated 3 weeks ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- GWAS Summary Statistics for Brain Imaging Phenotypes☆21Sep 6, 2021Updated 4 years ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 4 years ago
- user-friendly pipeline for GWAS fine-mapping☆14Mar 9, 2025Updated last year
- Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)☆10Jan 26, 2026Updated 3 months ago
- BrainSeq Phase II project lead by LIBD for the BrainSeq Consortium☆11Jan 7, 2024Updated 2 years ago
- ☆38Jan 20, 2021Updated 5 years ago
- Create Regional Association Plots☆13Sep 7, 2025Updated 8 months ago
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆12Sep 1, 2022Updated 3 years ago
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)☆14May 20, 2021Updated 5 years ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆17Mar 17, 2026Updated 2 months ago
- ☆12Dec 4, 2023Updated 2 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆25Feb 1, 2020Updated 6 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Aug 30, 2023Updated 2 years ago
- Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data☆71Nov 23, 2025Updated 6 months ago
- ☆13May 16, 2016Updated 10 years ago
- ☆36Dec 19, 2023Updated 2 years ago
- ☆37Jun 15, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆13Feb 2, 2023Updated 3 years ago
- Mediated Expression Score Regression (MESC)☆28Nov 4, 2025Updated 6 months ago
- ☆15Nov 17, 2025Updated 6 months ago
- ☆14May 25, 2018Updated 7 years ago
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Mar 24, 2023Updated 3 years ago
- A software package for performing and visualising radial multivariable Mendelian randomization analyses☆13May 14, 2026Updated last week
- Codes for our NPNT paper at Nature Metabolism☆16Feb 9, 2024Updated 2 years ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆39Apr 26, 2024Updated 2 years ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- We design a method for heritability estimation, namely LD Eigenvalue Regression (LDER), which extends the LDSC method and provides more a…☆13Aug 20, 2025Updated 9 months ago
- Gaussian imputation of GWAS summary statistics☆15Apr 16, 2015Updated 11 years ago
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- ☆14Aug 9, 2017Updated 8 years ago
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆41Nov 3, 2025Updated 6 months ago
- ☆13Jul 4, 2023Updated 2 years ago
- An R package for creating ggplot2 based miami plots.☆18Mar 7, 2025Updated last year