erwinerdem / STEAPLinks
Single cell Type Enrichment Analysis for Phenotypes (STEAP)
☆13Updated 4 years ago
Alternatives and similar repositories for STEAP
Users that are interested in STEAP are comparing it to the libraries listed below
Sorting:
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆18Updated 4 years ago
- Cross-population analysis using GWAS summary statistics☆18Updated last year
- ☆30Updated 2 months ago
- TCSC (Tissue co-regulation score regression) is a statistical genetics method to identify causal tissues in diseases and complex traits.☆13Updated 11 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆41Updated 7 years ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated 2 years ago
- ☆13Updated 3 years ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆33Updated 2 months ago
- Multi-Trait Genome-Wide Association Analysis☆19Updated last year
- ☆26Updated 5 years ago
- Pleiotropy-informed conditional and conjunctional false discovery rate☆33Updated 3 months ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆29Updated 3 weeks ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆55Updated 4 years ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆36Updated last year
- FLAMES: Accurate gene prioritization in GWAS loci☆44Updated 6 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆54Updated last year
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated last year
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆18Updated 3 months ago
- Software to infer latent pleiotropic components from GWAS summary data☆15Updated 7 months ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆34Updated last week
- GWAS Summary Statistics for Brain Imaging Phenotypes☆20Updated 4 years ago
- Tissue-Gene Fine-Mapping☆21Updated 6 months ago
- ☆20Updated 2 weeks ago
- ☆21Updated 3 years ago
- An R package for creating ggplot2 based miami plots.☆17Updated 6 months ago
- ☆57Updated 8 months ago
- ☆37Updated 4 years ago
- A powerful TWAS framework leveraging summary-level reference data☆31Updated 5 months ago
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Updated 2 years ago
- ☆18Updated last month