jokamoto97 / INTACTLinks
Integration of TWAS and Colocalization Analysis
☆17Updated 11 months ago
Alternatives and similar repositories for INTACT
Users that are interested in INTACT are comparing it to the libraries listed below
Sorting:
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated 2 years ago
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago
- Create Regional Association Plots☆12Updated last month
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated 2 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated 3 months ago
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Updated 2 years ago
- GENI plots to visualise results from genome-wide association studies☆30Updated 11 months ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 3 years ago
- Tool for predicting TWAS features (e.g. gene expression) in a target sample☆16Updated 3 months ago
- This is a pipeline for calculating weights for TWAS☆32Updated 3 years ago
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆11Updated 3 years ago
- Fine-mapping method only using summary statistics☆20Updated 9 years ago
- R script for generating functionally informed genetic risk scores from TWAS☆11Updated 2 years ago
- ☆20Updated 2 months ago
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆37Updated 8 months ago
- ☆12Updated last year
- ☆20Updated 3 weeks ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆19Updated 3 months ago
- MR-link-2: pleiotropy robust cis MR☆20Updated 2 months ago
- ☆21Updated last year
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆30Updated last week
- Workflow for performing cistrome-wide associations studies☆10Updated 3 years ago
- Tissue-Gene Fine-Mapping☆23Updated 6 months ago
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆15Updated 3 weeks ago
- 🌓 Allele specific analyses across cell states and conditions☆10Updated 2 years ago
- ☆19Updated 2 months ago
- Collaborative genetic studies of idiopathic pulmonary fibrosis☆18Updated last week
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆20Updated last month
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆11Updated 2 months ago
- Regional association plots☆25Updated last year