konumat / Trans-PharLinks
GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline
☆18Updated 4 years ago
Alternatives and similar repositories for Trans-Phar
Users that are interested in Trans-Phar are comparing it to the libraries listed below
Sorting:
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Updated 2 years ago
- Fine-mapping method only using summary statistics☆20Updated 9 years ago
- ☆25Updated 2 weeks ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆27Updated 2 years ago
- ☆8Updated 5 months ago
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆15Updated last year
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆16Updated last month
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated last year
- ☆28Updated 3 years ago
- ☆12Updated last year
- TCSC (Tissue co-regulation score regression) is a statistical genetics method to identify causal tissues in diseases and complex traits.☆13Updated 9 months ago
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago
- Integration of TWAS and Colocalization Analysis☆17Updated 8 months ago
- ☆20Updated 10 months ago
- ☆24Updated 4 years ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated 2 years ago
- Cross-population analysis using GWAS summary statistics☆18Updated last year
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated 2 weeks ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 3 years ago
- ☆11Updated 3 years ago
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆11Updated 2 years ago
- pQTL tools☆21Updated 3 months ago
- Workflow for performing cistrome-wide associations studies☆10Updated 2 years ago
- ☆11Updated 2 years ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆54Updated 4 years ago
- Collaborative genetic studies of idiopathic pulmonary fibrosis☆17Updated 5 months ago
- EXpression PREdiction with Summary Statistics Only☆11Updated last year
- Single cell Type Enrichment Analysis for Phenotypes (STEAP)☆13Updated 4 years ago
- ☆16Updated 4 months ago
- An accurate and efficient colocalization method accounting for multiple causal signals☆11Updated last year