konumat / Trans-Phar
GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline
☆17Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for Trans-Phar
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated last year
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Updated last year
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated last year
- ☆8Updated last year
- ☆11Updated 2 years ago
- Estimate genetic correlation using predicted expression☆19Updated 6 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated 7 months ago
- Transcriptome-wide association study of Major Depressive Disorder☆12Updated 4 years ago
- ☆11Updated 2 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆23Updated last year
- ☆23Updated 4 years ago
- Create Regional Association Plots☆10Updated 3 months ago
- Fine-mapping method only using summary statistics☆15Updated 8 years ago
- Workflow for performing cistrome-wide associations studies☆10Updated 2 years ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆24Updated 6 months ago
- Cross-population analysis using GWAS summary statistics☆17Updated 4 months ago
- Integration of TWAS and Colocalization Analysis☆13Updated 3 weeks ago
- Pair-wise enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆18Updated this week
- Software to infer latent pleiotropic components from GWAS summary data☆12Updated last month
- GWAS genetics Fine-mapping method☆18Updated last month
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆11Updated 2 years ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆13Updated 3 years ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆31Updated last month
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆40Updated 3 years ago
- ☆23Updated 3 years ago
- Regional association plots☆25Updated 7 months ago
- BWMR (Bayesian Weighted Mendelian Randomization)☆17Updated last year
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- Kidney Epigenome and Transcriptome-based multi-stage Prioritization☆16Updated 2 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago