Alternatives and similar repositories for sushie:

Users that are interested in sushie are comparing it to the libraries listed below

• anastasia-lucas / hudson
  An R package for creating mirrored Manhattan plots
  ☆18Updated 2 years ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 2 years ago
• Marijn-Schipper / FLAMES
  FLAMES: Accurate gene prioritization in GWAS loci
  ☆31Updated 3 weeks ago
• jrs95 / geni.plots
  GENI plots to visualise results from genome-wide association studies
  ☆27Updated 5 months ago
• bogdanlab / fizi
  Leveraging functional information to improve GWAS summary statistic imputation
  ☆20Updated 3 years ago
• thewonlab / H-MAGMA
  ☆32Updated last year
• MRC-Epid / pGWAS_discovery
  Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"
  ☆23Updated 3 years ago
• xtonyjiang / GNOVA
  A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.
  ☆28Updated 9 months ago
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆27Updated 10 months ago
• lcrawlab / i-LDSC
  Code and simulations using interaction-LD score regression
  ☆13Updated 8 months ago
• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated last year
• bogdanlab / RHOGE
  Estimate genetic correlation using predicted expression
  ☆22Updated 7 years ago
• xihaoli / MetaSTAAR
  An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
  ☆22Updated 4 months ago
• sb452 / mr-code
  Code for implementing Mendelian randomization investigations
  ☆16Updated 9 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆44Updated last year
• juliedwhite / miamiplot
  An R package for creating ggplot2 based miami plots.
  ☆16Updated 3 weeks ago
• myles-lewis / locuszoomr
  A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.
  ☆41Updated 3 weeks ago
• weizhou0 / GATE
  ☆22Updated last year
• mancusolab / ma-focus
  MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets
  ☆26Updated 11 months ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆51Updated 4 months ago
• zhwm / RSparsePro_LD
  RSparsePro for robust fine-mapping in the presence of LD mismatch
  ☆12Updated 4 months ago
• yanglab-emory / TIGAR
  ☆21Updated 4 months ago
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆31Updated 4 years ago
• clagiamba / moloc
  ☆34Updated 4 years ago
• LaurenceHowe / SiblingGWAS
  Scripts for running a sibling GWAS
  ☆15Updated 3 years ago
• immunogenomics / IMPACT
  Code for creating cell-type-specific regulatory element annotation files
  ☆18Updated 9 months ago
• hakyimlab / scPrediXcan
  ☆13Updated 2 weeks ago
• kjgleason / Primo
  Primo
  ☆16Updated 3 years ago
• boxiangliu / locuscompare
  LocusCompare is an interactive visualization tool for comparing two genetic association datasets.
  ☆21Updated last year
• jrs95 / gassocplot
  Regional association plots
  ☆26Updated last year