mancusolab / sushieLinks
Software to perform multi-ancestry SNP fine-mapping on molecular data
☆29Updated last week
Alternatives and similar repositories for sushie
Users that are interested in sushie are comparing it to the libraries listed below
Sorting:
- Mediated Expression Score Regression (MESC)☆27Updated 3 months ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Updated 2 years ago
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆29Updated 2 years ago
- causal TWAS (cTWAS)☆47Updated 3 weeks ago
- Scripts for running a sibling GWAS☆16Updated 3 years ago
- GENI plots to visualise results from genome-wide association studies☆31Updated last year
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆53Updated 11 months ago
- Colocalization analysis of genetic association signals☆53Updated 8 months ago
- Code and simulations using interaction-LD score regression☆13Updated last year
- harmonization, liftover, and imputation of summary statistics from GWAS☆35Updated 5 years ago
- QTL Discovery using Annotations☆28Updated 3 years ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆43Updated 3 years ago
- ☆22Updated 3 weeks ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆27Updated 4 years ago
- Leveraging functional information to improve GWAS summary statistic imputation☆19Updated 4 years ago
- ☆13Updated 3 years ago
- ☆24Updated last month
- A Fine-Mapping pipeline☆22Updated 6 years ago
- Primo☆16Updated 4 years ago
- Cross-population fine-mapping☆41Updated last year
- ☆24Updated 4 years ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Updated 3 years ago
- ☆18Updated 8 years ago
- Regional association plots☆26Updated last year
- ☆35Updated 2 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆71Updated last week
- ☆22Updated 2 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆33Updated 8 months ago
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆27Updated 2 years ago