FOCUS: Fine-mapping Of CaUsal gene Sets
☆48Aug 30, 2023Updated 2 years ago
Alternatives and similar repositories for focus
Users that are interested in focus are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆39Apr 26, 2024Updated 2 years ago
- Leveraging functional information to improve GWAS summary statistic imputation☆20Aug 10, 2021Updated 4 years ago
- UTMOST (unified test for molecular signatures) is a method for cross-tissue gene expression imputation for transcriptome-wide association…☆46Oct 23, 2025Updated 6 months ago
- ☆27Aug 20, 2020Updated 5 years ago
- ☆57Jan 16, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Stratified squared trans-ethnic genetic correlation☆14May 12, 2022Updated 3 years ago
- methods for functional summary-based imputation☆102Mar 17, 2026Updated last month
- Colocalisation pipeline for Open Targets Genetics☆18Apr 8, 2022Updated 4 years ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆19Mar 30, 2021Updated 5 years ago
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆30Jun 18, 2023Updated 2 years ago
- Mediated Expression Score Regression (MESC)☆28Nov 4, 2025Updated 5 months ago
- Regional association plots☆27Apr 1, 2024Updated 2 years ago
- ☆30Oct 18, 2021Updated 4 years ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Cross-population weighting framework to improve genetic risk prediction in ancestrally diverse populations☆17Feb 19, 2026Updated 2 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42May 2, 2018Updated 7 years ago
- Make interactive LocusZoom plots from a local GWAS file☆10May 9, 2025Updated 11 months ago
- ☆19Aug 7, 2025Updated 8 months ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆207Jul 6, 2023Updated 2 years ago
- Estimate genetic correlation using predicted expression☆25Mar 8, 2018Updated 8 years ago
- Fine-mapping method only using summary statistics☆20Mar 23, 2016Updated 10 years ago
- Software implementing the Latent Causal Variable Model☆65Jun 30, 2020Updated 5 years ago
- ☆13Feb 2, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 3 years ago
- Visualization of Colocalization Between eQTL and GWAS Data☆88May 13, 2022Updated 3 years ago
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆21May 27, 2021Updated 4 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆39Sep 18, 2025Updated 7 months ago
- software package for integrative genetic association analysis☆36Jul 8, 2023Updated 2 years ago
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆30Apr 15, 2026Updated 2 weeks ago
- Single cell Type Enrichment Analysis for Phenotypes (STEAP)☆14Jun 16, 2021Updated 4 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Feb 27, 2020Updated 6 years ago
- Create LocusZoom-style plots in R.☆22Mar 5, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆18Aug 30, 2024Updated last year
- High-definition likelihood inference of genetic correlations (HDL)☆135Mar 15, 2026Updated last month
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆20Nov 26, 2023Updated 2 years ago
- An R package for creating ggplot2 based miami plots.☆18Mar 7, 2025Updated last year
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- ☆37Jun 15, 2023Updated 2 years ago
- Binaries for tools used in genetics in an R package☆12Apr 7, 2025Updated last year