karltayeb / cafehLinks
☆13Updated 2 years ago
Alternatives and similar repositories for cafeh
Users that are interested in cafeh are comparing it to the libraries listed below
Sorting:
- Mediated Expression Score Regression (MESC)☆27Updated 2 months ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- software package for integrative genetic association analysis☆35Updated 2 years ago
- ☆36Updated 2 years ago
- GWAS gold standards repository☆39Updated 2 years ago
- Pairwise Hierarchical Model☆20Updated 3 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆35Updated last month
- Repo for generating custom blacklist for reads originating from mitochondrial DNA to nuclear genome☆22Updated 3 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆29Updated 2 years ago
- Pan-transcriptomic phenotyping☆18Updated 2 months ago
- GWAS genetics Fine-mapping method☆26Updated last year
- Code for implementing Mendelian randomization investigations☆19Updated 10 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆29Updated last month
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆19Updated 2 years ago
- causal TWAS (cTWAS)☆47Updated 3 weeks ago
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆42Updated last year
- Stratified squared trans-ethnic genetic correlation☆14Updated 3 years ago
- Cross-population fine-mapping☆41Updated last year
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 5 years ago
- Statistical fine-mapping pipeline in FinnGen☆31Updated 3 months ago
- ☆24Updated 4 years ago
- cancereffectsizeR: Estimate somatic mutation rates and quantify selection in cancer☆19Updated last week
- ☆22Updated 3 months ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆35Updated 5 years ago
- Fine-mapping with infinitesimal effects☆20Updated 7 months ago
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆26Updated 6 years ago
- scover☆24Updated 2 years ago