GAME was designed for the functional genomics community to create seamless communication across pre-trained models and genomics datasets. It is a product of the feedback from many model and dataset experts and our hope is that it allows for long-lasting benchmarking of models.
☆23Oct 25, 2026Updated this week
Alternatives and similar repositories for Genomic-API-for-Model-Evaluation
Users that are interested in Genomic-API-for-Model-Evaluation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Biological sequence analysis for the modern age.☆330Oct 20, 2026Updated last week
- Blog page for the Genomics x AI community☆16Updated this week
- A lightweight reimplementation of some of the algorithms in the MEME suite in Python.☆39Sep 29, 2026Updated last month
- Identifying transcription factor binding sites from neural network contribution scores☆28Aug 26, 2026Updated 2 months ago
- accurate prediction of promoter activity and variant effects from massive parallel reporter assays☆46Jul 3, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Feb 6, 2023Updated 3 years ago
- ☆52Oct 19, 2026Updated last week
- AlphaGenome PyTorch port☆163Sep 15, 2026Updated last month
- Cherimoya is a lightweight sequence-to-function (S2F) model that is small, fast, and easy to use. Now usable by agents.☆70Updated this week
- Genomic Features in Python from BioConductor's AnnotationHub☆22Updated this week
- ☆15May 1, 2026Updated 5 months ago
- Python package to predict enhancer-gene interactions supervised on CRISPRi data☆16Nov 21, 2023Updated 2 years ago
- RNA-seq prediction with deep convolutional neural networks.☆268Sep 30, 2026Updated last month
- Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"☆15Sep 26, 2017Updated 9 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A lite implementation of tfmodisco, a motif discovery algorithm for genomics experiments.☆94Oct 17, 2026Updated 2 weeks ago
- genome-spy-python is a declarative genomics visualization library for Python, built on top of the genome-spy JSON specification.☆29Updated this week
- A high-performance BigWig and BigBed library in Rust☆128Aug 14, 2026Updated 2 months ago
- ☆11Jul 1, 2025Updated last year
- For fine-tuning Enformer using paired WGS & gene expression data☆32Aug 27, 2025Updated last year
- RiboNN: predicting translation efficiencies from mRNA sequences☆69Sep 30, 2026Updated last month
- This repository hosts a minimal version of a Python API for BPNet.☆61Oct 19, 2026Updated last week
- A fast dataloader for bigwig files made for machine learning☆29Dec 16, 2025Updated 10 months ago
- A suite of tools for machine learning with genomics data☆14May 25, 2026Updated 5 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Annotated sequence data☆11Feb 2, 2025Updated last year
- ☆13Feb 16, 2019Updated 7 years ago
- Saluki, a method to predict mRNA half-lives from sequence☆32Oct 7, 2022Updated 4 years ago
- JanusDNA☆33Mar 19, 2026Updated 7 months ago
- Analyses related to the Borzoi paper.☆33Oct 1, 2026Updated 3 weeks ago
- ☆37Jan 27, 2025Updated last year
- Machine learning methods for DNA sequence analysis.☆66Sep 30, 2026Updated last month
- Bias factorized, base-resolution deep learning models of chromatin accessibility (chromBPNet)☆260Jun 9, 2026Updated 4 months ago
- Benchmarks for classification of genomic sequences☆185Aug 14, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆53Mar 22, 2026Updated 7 months ago
- Snakemake workflow for comparing E-G links to experimental data☆27Sep 10, 2026Updated last month
- TF MOtif Discovery from Importance SCOres☆198Oct 16, 2026Updated 2 weeks ago
- Transcription Factor Motif Instance Neighborhood Decomposition and Interpretation☆28Oct 12, 2026Updated 2 weeks ago
- Implementation of AlphaGenome, Deepmind's updated genomic attention model☆15Feb 4, 2026Updated 8 months ago
- ☆25Aug 20, 2024Updated 2 years ago
- A collection of snakemake scripts to streamline genome annotation☆14Mar 24, 2026Updated 7 months ago