Benchmarks for classification of genomic sequences
☆179Aug 14, 2025Updated 11 months ago
Alternatives and similar repositories for genomic_benchmarks
Users that are interested in genomic_benchmarks are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena☆799Apr 22, 2025Updated last year
- Foundation Models for Genomics & Transcriptomics☆901Feb 24, 2026Updated 5 months ago
- Bi-Directional Equivariant Long-Range DNA Sequence Modeling☆249Mar 18, 2026Updated 4 months ago
- JanusDNA☆31Mar 19, 2026Updated 4 months ago
- [ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome☆507Jan 1, 2026Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆52Mar 22, 2026Updated 4 months ago
- ☆17Nov 8, 2024Updated last year
- A Large-Scale Dataset and Framework for Genomic Foundation Model Benchmarking☆32Jun 29, 2026Updated 3 weeks ago
- Code repository for study ''Evaluating the representational power of pre-trained DNA language models for regulatory genomics"☆25Jun 26, 2024Updated 2 years ago
- Genomic Pre-trained Network☆349Updated this week
- A command-line tool to mitigate homology-based data leakage in sequence-to-expression models☆21Jun 8, 2026Updated last month
- Evolution-inspired data augmentations for PyTorch-based models for regulatory genomics☆25Jun 3, 2025Updated last year
- [NPJ AI] A foundation model for individual genome modelling☆27May 9, 2026Updated 2 months ago
- Deep Learning For Biological Sequence Data: From Convolutional Neural Networks To Transformers, our tutorial into DL presented at 21st Eu…☆10Sep 20, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆19Jun 11, 2026Updated last month
- Blog page for the Genomics x AI community☆15Updated this week
- A deep learning approach to predicting transcription initiation from sequence at single nucleotide resolution☆15Jul 14, 2026Updated last week
- Explore a comprehensive collection of basic theories, applications, papers, and best practices about Large Language Models (LLMs) in geno…☆152Jul 10, 2026Updated 2 weeks ago
- ☆25Apr 22, 2026Updated 3 months ago
- Provide RNA and DNA Foundation Model Benchmarks and Applications☆29Nov 26, 2025Updated 7 months ago
- [ICML 2025] Fast and Low-Cost Genomic Foundation Models via Outlier Removal.☆19Jun 19, 2025Updated last year
- Library to extract embeddings for DNA sequences using BioFM genomics foundation model☆21Aug 13, 2025Updated 11 months ago
- GENA-LM is a transformer masked language model trained on human DNA sequence.☆230Updated this week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- PDLLMs: A group of tailored DNA large language models (LLMs) for analyzing plant genomes☆54Jun 5, 2026Updated last month
- Pytorch implementation of the Borzoi model from Calico, and Flashzoi, a 3x faster Borzoi enhancement.