Container class to represent genomic locations and support genomic analysis
☆27Apr 27, 2026Updated this week
Alternatives and similar repositories for GenomicRanges
Users that are interested in GenomicRanges are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pyranges: a Python framework for ultrafast sequence interval operations☆53Apr 21, 2026Updated last week
- A Rust library and command line tool for working with genomic ranges and their data.☆100May 29, 2024Updated last year
- Read RDS files, in Python☆28Updated this week
- Feature-rich Python implementation of the tximport package for gene count estimation.☆44Apr 21, 2026Updated last week
- Take command of your set enrichment analyses.☆23Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A program for the analysis of single cell nanopore long read data☆20Jul 1, 2025Updated 9 months ago
- The python binding for D4 format☆16Oct 22, 2021Updated 4 years ago
- Wrapper over rust-htslib for building collections of BAM records for testing.☆10Dec 1, 2025Updated 4 months ago
- A fast dataloader for bigwig files made for machine learning☆29Dec 16, 2025Updated 4 months ago
- Build contrasts for models defined with formulaic☆12Updated this week
- Blazing-Fast Bioinformatic Operations on Python DataFrames☆158Updated this week
- ☆12Dec 1, 2021Updated 4 years ago
- ☆15Mar 27, 2026Updated last month
- Performant Pythonic GenomicRanges☆494Updated this week
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Rust Backend for PyRanges Operations. More featureful and much faster replacement for the NCLS library☆30Apr 16, 2026Updated last week
- Lightweight Python interfaces for reading, writing, and querying genomic regions (BED)☆15Mar 27, 2026Updated last month
- Cookiecutter profile for making a NextFlow-based bioinformatics tool☆17Jul 8, 2024Updated last year
- ☆44Feb 12, 2026Updated 2 months ago
- Annotated sequence data☆11Feb 2, 2025Updated last year
- ☆15Oct 16, 2025Updated 6 months ago
- A python library for accessing 2bit files☆21Apr 21, 2026Updated last week
- GREAT algorithm in Python☆15Oct 24, 2022Updated 3 years ago
- A declarative interactive genomics visualization library for Python.☆243Nov 24, 2025Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A set of command line utilities based on Rust-Bio.☆205Jun 24, 2024Updated last year
- bedtools-like functionality for interval sets in rust☆55Aug 5, 2025Updated 8 months ago
- Jax code for functional genomics ML☆14Mar 5, 2025Updated last year
- ☆14Sep 1, 2024Updated last year
- A lightweight reimplementation of some of the algorithms in the MEME suite in Python.☆32Mar 17, 2026Updated last month
- A high-performance BigWig and BigBed library in Rust☆113Feb 13, 2026Updated 2 months ago
- a lexicographically-based GTF/GFF sorter☆38Mar 16, 2026Updated last month
- Snakemake workflow to benchmark scRNA-seq data simulators☆14Aug 10, 2022Updated 3 years ago
- ☆16Sep 8, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆43Dec 18, 2025Updated 4 months ago
- GenoTools: Advanced Genotype Data Analysis A robust suite for processing genotype data, offering genotype calling (.idat to PLINK), comp…☆35Feb 13, 2026Updated 2 months ago
- deploy a snakemake pipeline directly from version control (under development)☆25Mar 12, 2026Updated last month
- FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program☆19Sep 16, 2021Updated 4 years ago
- ☆49Mar 22, 2026Updated last month
- BigWig and BAM utilities☆103Mar 26, 2024Updated 2 years ago
- ☆20Jul 16, 2024Updated last year