Marsilea-viz / legendkit
Legend made easy for matplotlib
☆27Updated 3 months ago
Alternatives and similar repositories for legendkit:
Users that are interested in legendkit are comparing it to the libraries listed below
- ☆23Updated last week
- Blazing fast toolkit to work with .hic and .cool files☆29Updated last week
- Feature-rich Python implementation of the tximport package for gene count estimation.☆36Updated last month
- Python reimplementation of hicrep with compatibility for sparse matrices☆17Updated 2 years ago
- a minimal, scriptable genome browser for python☆51Updated 4 months ago
- A spatial genome aligner for analyzing multiplexed DNA-FISH imaging data.☆18Updated last year
- snakemake pipeline for Hi-C post-processing☆22Updated 10 months ago
- Builds a PEP from SRA or GEO accessions☆49Updated 7 months ago
- ☆43Updated 3 weeks ago
- pycistarget is a python module to perform motif enrichment analysis in sets of regions with different tools and identify high confidence …☆17Updated 3 months ago
- Python bindings to UCSC BigWig and BigBed library☆33Updated 3 weeks ago
- Python bindings for hictk: read and write .cool and .hic files directly from Python☆15Updated this week
- SELFISH is a tool for finding differential chromatin interactions between two Hi-C contact maps.☆17Updated last year
- Multi-omics factor analysis v2☆44Updated 6 months ago
- Architectural stripe detection from 3D genome conformation data☆17Updated last year
- Molecular interactions inference from single-cell multi-omics data☆24Updated 3 weeks ago
- Tools for DLO HiC data analyze☆16Updated 2 years ago
- ☆42Updated 6 months ago
- Reusable tools for working with next-generation sequencing (NGS) data☆12Updated 7 months ago
- FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program☆19Updated 3 years ago
- A simple pythonic interface to biomart.☆55Updated 5 years ago
- Port of symphony algorithm of single-cell reference atlas mapping to Python☆28Updated 5 months ago
- Splicing Neo Antigen Finder (SNAF) is an easy-to-use Python package to identify splicing-derived tumor neoantigens from RNA sequencing da…☆47Updated 2 months ago
- A Python library to visualize and analyze long-read transcriptomes☆62Updated last week
- Web-Application for the cross-visualization of HiC and ChIP-seq data.☆18Updated 5 months ago
- A fast dataloader for bigwig files made for machine learning☆28Updated last week
- Information-based dimensionality reduction☆29Updated 4 months ago
- TF analysis from epigenetic and Hi-C data☆17Updated last month
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆30Updated 3 years ago
- Python implementation of HiCRep stratum-adjusted correlation coefficient of Hi-C data with Cooler sparse contact matrix support☆38Updated last year