Marsilea-viz / legendkitLinks
Legend made easy for matplotlib
☆32Updated 5 months ago
Alternatives and similar repositories for legendkit
Users that are interested in legendkit are comparing it to the libraries listed below
Sorting:
- snakemake pipeline for Hi-C post-processing☆22Updated last year
- Python reimplementation of hicrep with compatibility for sparse matrices☆18Updated 2 years ago
- Feature-rich Python implementation of the tximport package for gene count estimation.☆37Updated 3 weeks ago
- Python bindings to UCSC BigWig and BigBed library☆35Updated 3 weeks ago
- Architectural stripe detection from 3D genome conformation data☆18Updated 2 months ago
- Python bindings for hictk: read and write .cool and .hic files directly from Python☆16Updated this week
- Universal Single-Cell Genomics Preprocessing package☆44Updated 2 weeks ago
- Builds a PEP from SRA or GEO accessions☆53Updated 2 weeks ago
- Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer☆61Updated 3 weeks ago
- SIP: Significant Interaction Peak caller☆15Updated 6 months ago
- A rust framework to make using alevin-fry even simpler☆60Updated 6 months ago
- Red-C data processing☆15Updated 2 years ago
- Blazing fast toolkit to work with .hic and .cool files☆41Updated this week
- a minimal, scriptable genome browser for python☆52Updated 11 months ago
- Tools for DLO HiC data analyze☆16Updated 3 years ago
- Comparison of Hi-C Experiments using Structural Similarity.☆27Updated 2 years ago
- A spatial genome aligner for analyzing multiplexed DNA-FISH imaging data.☆18Updated 2 years ago
- Python implementation of HiCRep stratum-adjusted correlation coefficient of Hi-C data with Cooler sparse contact matrix support☆39Updated last year
- DeepLoop robustly identifies enhancer-promoter interactions from low-depth and single-cell Hi-C data☆34Updated 7 months ago
- Single-cell Hi-C data analysis toolbox☆27Updated 4 years ago
- A Python library to visualize and analyze long-read transcriptomes☆63Updated 6 months ago
- Paired Genomic Loci Tool Suite☆32Updated 3 years ago
- A tool for fast and accurate summarizing of variant calling format (VCF) files☆61Updated 2 years ago
- Particle dynamics and simulated annealing for chromosome structure calculation☆28Updated last year
- Transcription Factor Enrichment Analysis☆36Updated 3 weeks ago
- Bam to Pandas DataFrame, quickly☆13Updated 6 months ago
- A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains☆44Updated 3 years ago
- dcHiC: Differential compartment analysis for Hi-C datasets☆73Updated last year
- Universal RObust Peak Annotator☆16Updated last year
- splicing and feature maps for RBPs☆25Updated 3 years ago