Alternatives and similar repositories for Translatomer:

Users that are interested in Translatomer are comparing it to the libraries listed below

• sjgosai / boda2
  Computational Optimization of DNA Activity (CODA)
  ☆56Updated 2 months ago
• jzhoulab / puffin_manuscript
  ☆17Updated 5 months ago
• lanagarmire / Asgard
  ☆41Updated last year
• pinellolab / EPInformer
  code to run EPInformer for gene expression prediction and gene-enhancer links prioritization
  ☆38Updated 4 months ago
• pfenninglab / TACIT
  OCR-Phenotype Association from Tissue-Aware Conservation Inference Toolkit
  ☆18Updated 6 months ago
• josephreplogle / guide_calling
  Tools for sgRNA calling in direct capture Perturb-seq data
  ☆32Updated last year
• mhorlacher / rbpnet
  ☆18Updated last year
• johahi / borzoi-pytorch
  Pytorch implementation of the Borzoi model from Calico, and Flashzoi, a 3x faster Borzoi enhancement.
  ☆42Updated this week
• bioinformatics-sannio / ncrna-deep
  Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"
  ☆13Updated 4 years ago
• de-Boer-Lab / random-promoter-dream-challenge-2022
  ☆27Updated 2 months ago
• tianshilu / pMTnet
  Deep Learning the T Cell Receptor Binding Specificity of Neoantigen
  ☆78Updated 2 years ago
• XWangLabTHU / NeuronMotif
  NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks
  ☆15Updated last year
• emmijokinen / TCRconv
  TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…
  ☆24Updated 2 years ago
• Genentech / decima
  Decima is a Python library to train sequence models on single-cell RNA-seq data.
  ☆24Updated last week
• wassermanlab / ExplaiNN
  ExplaiNN: interpretable and transparent neural networks for genomics
  ☆47Updated last month
• cliffren / PENCIL
  PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.
  ☆28Updated last year
• zhuhr213 / HDRNet
  ☆11Updated last year
• FunctionLab / sei-manuscript
  Code for reproducing the Sei manuscript results
  ☆16Updated 3 years ago
• GET-Foundation / get_model
  A modular framework for multimodal cross-cell-type transcriptional regulation models
  ☆64Updated 3 weeks ago
• JiaqiLiZju / Nvwa
  ☆34Updated 2 years ago
• cantinilab / HuMMuS
  Molecular interactions inference from single-cell multi-omics data
  ☆22Updated 4 months ago
• antigenomics / tcren-ms
  📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential
  ☆18Updated 2 months ago
• mostafavilabuw / EnformerAssessment
  ☆19Updated 7 months ago
• yjgeno / GenKI
  ☆14Updated 11 months ago
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆42Updated last year
• kaitlin309 / PRIESSTESS
  ☆12Updated last year
• tanjimin / C.Origami
  C.Origami, a prediction and screening framework for cell type-specific 3D chromatin structure.
  ☆73Updated 8 months ago
• WanluLiuLab / scAtlasVAE
  ☆30Updated last month
• Hughes-Genome-Group / deepC
  A neural network framework for predicting the Hi-C chromatin interactions from megabase scale DNA sequence
  ☆33Updated 10 months ago
• johli / aparent
  APA Regression Net - Predict and Engineer Alternative Polyadenylation
  ☆39Updated 3 years ago