xiongxslab / TranslatomerLinks
☆24Updated 4 months ago
Alternatives and similar repositories for Translatomer
Users that are interested in Translatomer are comparing it to the libraries listed below
Sorting:
- ☆25Updated last year
- Code for reproducing the Sei manuscript results☆17Updated 3 years ago
- scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolution.☆51Updated 2 months ago
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆26Updated 3 years ago
- ExplaiNN: interpretable and transparent neural networks for genomics☆49Updated 9 months ago
- ☆18Updated last year
- model-based understanding of single-cell CRISPR screening☆26Updated last year
- ☆26Updated 7 months ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆30Updated last month
- ☆26Updated 8 months ago
- ☆36Updated 3 years ago
- code to run EPInformer for gene expression prediction and gene-enhancer link prediction☆44Updated 3 months ago
- ☆18Updated last year
- Analyses related to the Borzoi paper.☆25Updated 3 weeks ago
- ☆26Updated 2 years ago
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆19Updated last year
- Saluki, a method to predict mRNA half-lives from sequence☆27Updated 3 years ago
- https://www.biorxiv.org/content/10.1101/2023.07.03.547592v2☆32Updated 11 months ago
- Molecular interactions inference from single-cell multi-omics data☆30Updated 2 months ago
- APA Regression Net - Predict and Engineer Alternative Polyadenylation☆40Updated 4 years ago
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- Tools for sgRNA calling in direct capture Perturb-seq data☆39Updated 2 years ago
- Chromatin interaction aware gene regulatory modeling with graph attention networks☆28Updated 2 years ago
- Computational Optimization of DNA Activity (CODA)☆67Updated 9 months ago
- High-definition modeling of chromatin + transcriptomics data☆26Updated 8 months ago
- C.Origami, a prediction and screening framework for cell type-specific 3D chromatin structure.☆82Updated last year
- splicing and feature maps for RBPs☆25Updated 3 years ago
- Deep Learning Method to Identify Cancer Associated TCRs☆46Updated 3 years ago
- Inference of TCR motifs☆32Updated 6 months ago
- Weighted Nearest Neighbors Analysis implemented in Python (pyWNN)☆19Updated 4 years ago