CaoTianze / pandasgwasLinks
pandasGWAS: a Python package for easy retrieval of GWAS Catalog data
☆15Updated last year
Alternatives and similar repositories for pandasgwas
Users that are interested in pandasgwas are comparing it to the libraries listed below
Sorting:
- High-definition modeling of chromatin + transcriptomics data☆24Updated 3 months ago
- TF analysis from epigenetic and Hi-C data☆17Updated 4 months ago
- A method for analyzing scATAC-seq experiments.☆33Updated last month
- ☆35Updated 5 months ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- binned motif enrichment analysis and visualisation☆41Updated last week
- Benchmark of GRNs using the GRETA pipeline☆26Updated last week
- GWAS gold standards repository☆37Updated last year
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- Python package to predict enhancer-gene interactions supervised on CRISPRi data☆13Updated last year
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆15Updated 4 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- processes GoT amplicon data and generates a table of metrics☆31Updated 3 years ago
- Negative binomial regression for Spatial Transcriptomics data as described in Maaskola et al. 2018☆22Updated 6 years ago
- Bioinformatics pipeline for single-cell 3' UTR isoform quantification☆23Updated 8 months ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 4 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆28Updated 3 years ago
- Fast motif matching in R☆46Updated last year
- Tools for sgRNA calling in direct capture Perturb-seq data☆36Updated 2 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆53Updated 2 years ago
- ☆13Updated 2 years ago
- A python package for chromVAR☆28Updated 2 years ago
- ☆38Updated 2 years ago
- ☆17Updated last year
- Signed LD profile regression code☆17Updated last week
- ☆28Updated 6 years ago
- Calibrate and compare methods for denoising single-cell RNA-seq data☆2Updated 4 years ago