☆19Nov 24, 2024Updated last year
Alternatives and similar repositories for CELINA
Users that are interested in CELINA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cell type-specific SVG detection☆10Jan 28, 2026Updated 9 months ago
- Study of Multiple Sclerosis(MS) using paried snRNA-seq and Visium transcriptmics datasets.☆11Dec 11, 2024Updated last year
- Neighborhood Non-Negative Matrix Factorization☆11Sep 24, 2026Updated last month
- ☆137Feb 11, 2024Updated 2 years ago
- scTM: A package for topic modelling in transcriptomics data☆28May 1, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆37Jun 15, 2026Updated 4 months ago
- Spatially aware dimension reduction for spatial transcriptomics.☆71Mar 18, 2025Updated last year
- ☆18Mar 18, 2025Updated last year
- Bayesian Analytics for Spatial Segmentation☆34May 4, 2025Updated last year
- A permutation-free framework for scalable, robust, and reference-based cell-cell communication analysis in single cell transcriptomics st…☆29May 23, 2026Updated 5 months ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆47Feb 19, 2026Updated 8 months ago
- Identify spatially variable genes by projecting to morphologically relevant curves☆11Jul 12, 2026Updated 3 months ago
- ☆10Oct 7, 2024Updated 2 years ago
- A package that performs cell type annotations on single cell resolution of spatial transcriptomics data, find the niche interactions and …☆19Sep 25, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆12Sep 29, 2026Updated last month
- Cell-type Relationship Analysis Workflow Done Across Distances☆42Nov 18, 2025Updated 11 months ago
- Local Spatial Gradient Inference☆12Jul 28, 2025Updated last year
- Extension of SpatialExperiment with sf☆59Oct 27, 2026Updated last week
- Python playground for cell-type-specific biology☆14Aug 25, 2026Updated 2 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆23Mar 25, 2026Updated 7 months ago
- ☆14Nov 3, 2023Updated 3 years ago
- ☆11Aug 15, 2025Updated last year
- Spatially resolved transcriptomic analysis☆68Nov 17, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- NicheDE is a method that detects context dependent changes in gene expression in spatial transcriptomic data.☆23Jun 10, 2025Updated last year
- A computational framework☆20Jul 23, 2026Updated 3 months ago
- ☆30Oct 4, 2024Updated 2 years ago
- Reproducing result from the paper☆34May 12, 2021Updated 5 years ago
- A package containing metrics for evaluating subpopulation identification in clusterings, embeddings, graphs and space.☆11Jan 23, 2026Updated 9 months ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆35Jun 21, 2026Updated 4 months ago
- Python code for cross-condition label refinement in single-cell data with HiDDEN☆14Sep 21, 2024Updated 2 years ago
- ☆14Jun 1, 2026Updated 5 months ago
- ☆43Aug 29, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆20Sep 13, 2022Updated 4 years ago
- ☆20May 1, 2023Updated 3 years ago
- ☆56Mar 4, 2025Updated last year
- Package for analysis and experimental design of multiplexed imaging data☆12Mar 3, 2025Updated last year
- Spatially-aware quality control for spatial transcriptomics☆17Oct 16, 2026Updated 2 weeks ago
- R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening …