Dorothea package in Python
☆11Apr 5, 2022Updated 4 years ago
Alternatives and similar repositories for dorothea-py
Users that are interested in dorothea-py are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PROGENY Python implementation☆12Apr 5, 2022Updated 4 years ago
- ☆14Jan 16, 2019Updated 7 years ago
- ☆34Oct 4, 2021Updated 5 years ago
- Analysis framework for morphological profiling data☆14Updated this week
- ☆13Feb 16, 2019Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Manipulate KEGG networks as NetworkX objects in in Python☆10Jan 21, 2022Updated 4 years ago
- Quantitative proteomics workflow☆17Sep 30, 2022Updated 4 years ago
- Robust Allele Specific Quantification and quality controL☆10Jul 28, 2017Updated 9 years ago
- Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotat…☆164Updated this week
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆21Apr 14, 2025Updated last year
- Powerful and lightweight package to identify tissue compartments in spatial transcriptomics datasets.☆22Jun 9, 2025Updated last year
- Multiview Intercellular SpaTial modeling framework☆74Jan 15, 2026Updated 9 months ago
- Code for Nature Scientific Reports 2020 paper: "Unsupervised generative and graph neural methods for modelling cell differentiation" by I…☆18Jul 23, 2020Updated 6 years ago
- Warp your data like Jet warps your perception☆13Feb 16, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Weighted gene co-expression network analysis for scRNA-seq data in Seurat☆10Dec 15, 2023Updated 2 years ago
- ☆10Oct 31, 2021Updated 5 years ago
- Jupyter notebooks for CellProfiler and friends☆14Mar 23, 2018Updated 8 years ago
- ☆10Dec 14, 2016Updated 9 years ago
- An interface for Nested Stochastic Block Model for single cell analysis☆40Sep 2, 2026Updated 2 months ago
- Pareto Task Inference in Python☆23Updated this week
- A deep learning toolkit for LINCS L1000 expression data☆10Aug 25, 2021Updated 5 years ago
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Mar 28, 2023Updated 3 years ago
- Scripts for generating custom mosaics for the LEGO Art 'World Map' set☆27Jun 1, 2026Updated 5 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- USUM: Plotting sequence similarity using USEARCH & UMAP & t-SNE☆15Feb 26, 2021Updated 5 years ago
- Single-cell Colorectal Cancer Atlas with 4.27M cells☆24Aug 7, 2025Updated last year
- A Python package for gene network analysis☆33Jun 22, 2022Updated 4 years ago
- Python client for the OmniPath web service☆62Feb 19, 2026Updated 8 months ago
- Convert Scala files to SysEx files for use with the Prophet rev2 and Cirklon, etc.☆16Oct 4, 2026Updated 3 weeks ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆17Jul 7, 2023Updated 3 years ago
- Attempt at phillip rewrite in rllib. Also attempts at training from slippi replays.☆19Oct 5, 2019Updated 7 years ago
- Marker Selection by matching manifolds and elastic net☆23Oct 22, 2024Updated 2 years ago
- Python package to perform enrichment analysis from omics data.☆301Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This is a short response to the 2018 RFI on NIH Strategic Plan for Data Science☆16Apr 4, 2018Updated 8 years ago
- COMET Single-Cell Marker Detection tool☆33Jun 21, 2022Updated 4 years ago
- SingleCellFusion--a tool to integrate single-cell transcriptome and epigenome data☆13Mar 13, 2022Updated 4 years ago
- Rapid RNA-seq pipeline using AWS lambda functions for alignment☆13Mar 22, 2019Updated 7 years ago
- Miscellaneous documents☆13Dec 3, 2025Updated 10 months ago
- ☆24Oct 26, 2026Updated last week
- ☆13Jun 9, 2025Updated last year