Makes distinct TSS of each gene from a Gencode annotation
☆10Oct 19, 2016Updated 9 years ago
Alternatives and similar repositories for MakeGencodeTSS
Users that are interested in MakeGencodeTSS are comparing it to the libraries listed below
Sorting:
- A crate for working with the Task Execution Service (TES) specification.☆13Jan 8, 2026Updated 2 months ago
- Simple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)☆16May 21, 2014Updated 11 years ago
- ☆19Aug 22, 2016Updated 9 years ago
- Converts a CSV data file exported from REDCap into the NACC's UDS3 fixed-width format.☆10Aug 5, 2025Updated 7 months ago
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆11Mar 11, 2020Updated 6 years ago
- Simurai’s site as a Harp boilerplate.☆21Dec 11, 2015Updated 10 years ago
- Weakly-Supervised Cell Tracking via Backward-and-Forward Propagation, in ECCV 2020☆11Aug 4, 2020Updated 5 years ago
- A python library for checking if an email is issued by an academic institution. Useful for granting discounts, etc to academic users.☆15Feb 16, 2016Updated 10 years ago
- A versatile method for systematic identification of differential RNA splicing across platforms☆16Mar 12, 2026Updated last week
- A curated list of awesome Deep Learning tutorials, projects and communities. Deep learning相关学习资料. Forked from other github repositories.☆21Mar 30, 2017Updated 8 years ago
- ☆10Mar 11, 2025Updated last year
- A data processing platform for ChIP-seq, RNA-seq, MNase-seq, DNase-seq, ATAC-seq and GRO-seq datasets. Please ignore information on ciphe…☆19Dec 22, 2017Updated 8 years ago
- Analysis tool for NG-Capture-C, Tri-C and Tiled-C data☆10Oct 13, 2025Updated 5 months ago
- A modular, containerized pipeline for PRO-seq data processing☆11Mar 6, 2026Updated 2 weeks ago
- DEPRECIATED! Please use nf-core/tools instead☆19Aug 8, 2018Updated 7 years ago
- Learning motif contributions to cell transitions using sequence features and graphs.☆28Aug 30, 2024Updated last year
- Code repository for macsGESTALT single cell lineage tracing analysis https://doi.org/10.1101/2020.08.11.245787☆10May 10, 2021Updated 4 years ago
- Python implementation of TEISER also capable of using SHAPE structural probing data☆12Jan 7, 2025Updated last year
- Tutorials covering various topics in genomic data analysis.☆16Nov 29, 2018Updated 7 years ago
- ☆14Apr 17, 2021Updated 4 years ago
- ☆10Oct 24, 2024Updated last year
- A little Python software that creates a color-sorted image from any image☆10Jun 12, 2017Updated 8 years ago
- Prediction pipeline to generate prognosis predictors for Ebola Virus Disease☆12Feb 22, 2016Updated 10 years ago
- ☆16Jul 21, 2022Updated 3 years ago
- ☆10May 17, 2017Updated 8 years ago
- Chromatin State Maps in Mouse☆23May 16, 2018Updated 7 years ago
- ☆20Jan 1, 2022Updated 4 years ago
- LoopPredictor: Predicting unknown enhancer-mediated genome topology by an ensemble machine learning model☆14Jun 18, 2021Updated 4 years ago
- Step by step tutorial for CAGE analysis☆10Sep 18, 2025Updated 6 months ago
- Localization of transcribed enhancers and quntification of their usage from the initiation sites of bidirectionally transcribed loci☆14Dec 19, 2024Updated last year
- A python port of the Single Molecule Tools software by Adam Wollman, aka. ADEMSCode.☆11Mar 10, 2026Updated last week
- Experimental Marimo extension for Agentic Notebooks -- integrating AI Agents into the Notebook workflow☆13Oct 11, 2025Updated 5 months ago
- Spatial RNA velocity☆10Oct 3, 2024Updated last year
- Code for spatial subclone paper☆17Jan 23, 2025Updated last year
- This GCI/VCI 1.0 platform has now been retired, and replaced with our new 2.0 platform:☆25Sep 16, 2022Updated 3 years ago
- Workshop lesson for "Dynamic documents with RMarkdown and Knitr" that was hosted on May 11th, 2016 through the Data Intensive Biology Tra…☆14May 13, 2016Updated 9 years ago
- fork of dorado that supports S/BLOW5☆12Jan 8, 2026Updated 2 months ago
- LACE 2.0 is a new release of the LACE R Bioconductor package, which provides an interactive user interface to perform clonal evolution an…☆15Mar 9, 2026Updated last week
- Scripts for identifying sites with differential error rates in mapped nanopore DRS data☆11Nov 27, 2020Updated 5 years ago