sjroth / ARTDecoLinks
☆20Updated last year
Alternatives and similar repositories for ARTDeco
Users that are interested in ARTDeco are comparing it to the libraries listed below
Sorting:
- A list of alternative splicing analysis resources☆46Updated 6 months ago
- optimization of ribosome P-site positioning in ribosome profiling data☆54Updated 7 months ago
- Estimation of Promoter Activity from RNA-Seq data☆56Updated 2 months ago
- Estimate locus specific human LINE-1 expression.☆39Updated 3 weeks ago
- ☆62Updated 5 years ago
- Tutorial Website☆59Updated 4 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆68Updated 2 months ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆40Updated 3 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆80Updated 4 years ago
- An R interface to the MEME Suite☆52Updated 3 months ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆62Updated 2 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆62Updated 4 years ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆43Updated 10 months ago
- Single cell Nanopore sequencing data for Genotype and Phenotype☆53Updated 4 months ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆39Updated 8 months ago
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆31Updated last year
- polyApipe☆18Updated 8 months ago
- Notes on ChIP-seq and other-seq-related tools☆26Updated 2 months ago
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year
- ☆15Updated 3 years ago
- ☆59Updated 2 months ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆66Updated last year
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated last year
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆54Updated 4 years ago
- direct comparison of circular and linear RNA expression☆22Updated 4 years ago