pantherdb / pangoLinks
☆13Updated last week
Alternatives and similar repositories for pango
Users that are interested in pango are comparing it to the libraries listed below
Sorting:
- Functional Embedding of Gene Signatures☆48Updated last year
- bioinformatics plotting and tools☆59Updated last year
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆25Updated 3 years ago
- HLA-II ligand predictor.☆45Updated 2 years ago
- MHC Class I and Class II neoantigen binding prediction☆33Updated 5 months ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆73Updated 2 weeks ago
- flexible CDR based distance metrics☆69Updated last week
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆43Updated this week
- Knowledge-primed neural networks☆38Updated 2 years ago
- Connectivity Map analysis in MATLAB☆46Updated 4 years ago
- ☆38Updated 2 years ago
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆19Updated last year
- Deep Learning Method to Identify Cancer Associated TCRs☆47Updated 3 years ago
- Absolute quantification package based on quantms.io☆16Updated 3 months ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆25Updated 2 years ago
- R package for functionally scoring phosphorylation sites☆21Updated 6 years ago
- Analysis workflow for investigating the structural context of PTMs☆11Updated last year
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆74Updated 2 years ago
- accurate prediction of promoter activity and variant effects from massive parallel reporter assays☆43Updated 5 months ago
- Stitchr - a Python script to stitch together coding TCR nucleotide sequences from V, J, and CDR3 info☆61Updated 4 months ago
- ☆41Updated 5 years ago
- ☆96Updated last month
- ☆24Updated 3 months ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆34Updated 3 years ago
- MONET : MOdularising NEtwork Toolbox - https://doi.org/10.1093/bioinformatics/btaa236☆47Updated 4 years ago
- Computational Optimization of DNA Activity (CODA)☆65Updated 8 months ago
- ☆36Updated 5 months ago
- CDR3 clustering module providing a new method for fast and accurate clustering of large data sets of CDR3 amino acid sequences, and offer…☆54Updated last year
- Detailed explanation on how to setup database for NCBI IgBlast executable, and using it in Python☆30Updated 3 years ago
- Tool for Motif Deconvolution in large HLA-II ligand datasets without the need of prior alignment.☆15Updated 10 months ago