kaizhang / single-cell-benchmarkLinks
☆10Updated last year
Alternatives and similar repositories for single-cell-benchmark
Users that are interested in single-cell-benchmark are comparing it to the libraries listed below
Sorting:
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 6 months ago
- R package IReNA☆28Updated 8 months ago
- ☆36Updated 3 weeks ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 4 months ago
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆31Updated 3 months ago
- ☆27Updated last week
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated last month
- ☆10Updated 7 months ago
- Unagi: Deep Generative Model for Deciphering Cellular Dynamics and In-Silico Drug Discovery in Complex Diseases.☆23Updated 3 weeks ago
- ACTIONet single-cell analysis framework☆42Updated 10 months ago
- ☆23Updated 3 months ago
- cell type specific, trait-associated gene regulation☆27Updated 3 months ago
- Information-based dimensionality reduction☆29Updated 7 months ago
- Single cell omics biology annotations☆51Updated 2 months ago
- Reproducibility notebooks for scPoli☆18Updated 2 years ago
- A modular tool for proportion analysis in single-cell sequencing data☆22Updated 2 months ago
- cTPnet Package☆25Updated 3 years ago
- Pipeline to run scE2G☆27Updated 3 weeks ago
- ☆17Updated last year
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆13Updated 2 years ago
- ☆45Updated 2 weeks ago
- Inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data☆25Updated 2 years ago
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated last year
- ☆53Updated 8 months ago
- ☆27Updated 9 months ago
- ☆17Updated 10 months ago
- Computational pipeline to process EasySci-RNA data.☆20Updated last year
- ☆27Updated 4 months ago
- Code associated with the data analysis for Miyoshi & Morabito 2024☆20Updated last week
- ☆19Updated 2 months ago