Pytorch implementation of EpiFoundation
☆25Feb 25, 2025Updated last year
Alternatives and similar repositories for EpiFoundation
Users that are interested in EpiFoundation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Diffusion Model for Single-Cell Multiome Data Generation and Analysis☆31Feb 5, 2026Updated 2 months ago
- ☆27Aug 29, 2025Updated 7 months ago
- ☆18Jul 10, 2025Updated 9 months ago
- A foundation model for single-cell epigenomic data☆62Jan 6, 2026Updated 3 months ago
- [AAAI'26 Oral] Official Implementation of STAR-1: Safer Alignment of Reasoning LLMs with 1K Data☆33Apr 7, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆33Feb 21, 2024Updated 2 years ago
- Weakly supervised learning uncovers phenotypic signatures in single-cell data☆38Dec 17, 2025Updated 3 months ago
- A modular framework for multimodal cross-cell-type transcriptional regulation models☆103Apr 7, 2026Updated last week
- ☆62Apr 5, 2024Updated 2 years ago
- A statistical simulator for rational scRNA-seq experimental design☆12Dec 14, 2020Updated 5 years ago
- UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.☆55Feb 18, 2026Updated last month
- Flow2Spatial reconstructs spatial proteomics through transfer learning.☆22May 16, 2025Updated 11 months ago
- PULSAR: a Foundation Model for Multi-scale and Multicellular Biology☆30Mar 1, 2026Updated last month
- ChatCell: Facilitating Single-Cell Analysis with Natural Language☆52Jun 5, 2025Updated 10 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A single-cell RNA-seq data generative model☆18Jan 11, 2025Updated last year
- ☆56Dec 5, 2024Updated last year
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆159Nov 23, 2025Updated 4 months ago
- 10x Genomics analysis guides files☆31Updated this week
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆61May 30, 2024Updated last year
- An optimal transport-based algorithm for inferring cell trajectories of spatial transcriptomics.☆38Mar 30, 2025Updated last year
- ☆21Dec 23, 2025Updated 3 months ago
- pipeline for dog WGS alignment☆15Jun 27, 2023Updated 2 years ago
- ☆26Apr 9, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆13Feb 13, 2022Updated 4 years ago
- LLM agents for working with the SRA and associated bioinformatics databases.☆163Nov 13, 2025Updated 5 months ago
- Nextflow pipeline for cross-species integration and assessment of single cell RNA-seq datasets☆43Jul 20, 2025Updated 8 months ago
- Code associated with the data analysis for Miyoshi & Morabito 2024☆27Jul 8, 2025Updated 9 months ago
- ☆132Feb 13, 2025Updated last year
- ☆106Nov 6, 2025Updated 5 months ago
- Code used to benchmark Xenium☆80Updated this week
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated last year
- [ML4H'25] m1: Unleash the Potential of Test-Time Scaling for Medical Reasoning in Large Language Models☆48Dec 21, 2025Updated 3 months ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆94Apr 3, 2026Updated last week
- Code for paper "A deep profile of gene expression across 18 human cancers"☆31Dec 6, 2024Updated last year
- A model developed for the generation of scRNA-seq data☆87Jan 21, 2026Updated 2 months ago
- ☆10Mar 11, 2022Updated 4 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Jan 22, 2026Updated 2 months ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆17Mar 27, 2026Updated 2 weeks ago
- Python toolbox for multi-omics data mapping and analysis☆26Apr 13, 2023Updated 3 years ago