☆14Feb 19, 2024Updated 2 years ago
Alternatives and similar repositories for scPEFT
Users that are interested in scPEFT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- official repo for scPEFT☆53Jan 14, 2026Updated 4 months ago
- This study explored prompt-based learning to adapt the state-of-the-art image segmentation foundation model SAM for cryo-EM. Through tria…☆12Apr 27, 2025Updated last year
- ☆17May 8, 2026Updated 2 weeks ago
- Repository for custom module scripts for SMIDA☆13May 19, 2025Updated last year
- Interactive applications of stlearn☆16May 1, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Mar 9, 2021Updated 5 years ago
- ☆13Sep 30, 2024Updated last year
- ☆12Dec 4, 2023Updated 2 years ago
- An analysis pipeline for Nanostring nCounter expression data.☆18Apr 30, 2026Updated 3 weeks ago
- Tools for NanoString GeoMx Digital Spatial Profiler data for reading DCC and PKC files to NanoStringGeomxSet class, Normalization and QC.…☆48Sep 29, 2025Updated 7 months ago
- Tools for analyzing data on the image from NanoString GeoMx Digital Spatial Profiler (DSP).☆23Sep 29, 2025Updated 7 months ago
- Visualising data frames as funky heatmaps 📊, the Python implementation☆26Feb 6, 2025Updated last year
- A Cellular Regulatory Network-Aware Transcriptomics Foundation Model☆37Dec 18, 2025Updated 5 months ago
- Bayesian optimization of discrete sequences☆21Mar 27, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- detect temperate phage (active prophage) in assembled bacterial genome sequences☆15Feb 10, 2022Updated 4 years ago
- A flexible and fast sgRNA counter from FASTQ Files☆11Dec 29, 2025Updated 4 months ago
- A Python implementation of the LEMUR algorithm for analyzing multi-condition single-cell RNA-seq data.☆28Jan 3, 2025Updated last year
- BOSTIn is a new, user-friendly phylogenetic artifact identification package.☆11May 13, 2026Updated last week
- Code for evaluating single cell foundation models scBERT and scGPT☆48Aug 25, 2024Updated last year
- Python implementation of Gene Trajectory☆30Sep 4, 2024Updated last year
- A repo to reproduce the experiments in the YACHT manuscript☆12Nov 2, 2023Updated 2 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Mar 7, 2025Updated last year
- plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 style☆17Dec 19, 2025Updated 5 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Pytorch Implementation of SMOTE☆18Feb 6, 2021Updated 5 years ago
- ☆29Updated this week
- Python bindings for SingleR☆16May 6, 2026Updated 2 weeks ago
- Fast genealogical relationship evaluation of bacterial isolates with WGS data.☆12Jan 17, 2022Updated 4 years ago
- ☆13Jun 4, 2023Updated 2 years ago
- ☆13Feb 29, 2024Updated 2 years ago
- ☆17Dec 3, 2025Updated 5 months ago
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆37Apr 2, 2025Updated last year
- A Generative Pre-Trained Transformer Package for Pangenomes☆53May 19, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆17Jan 6, 2025Updated last year
- Supporting data files and code for the publication by Shilts et al.☆31Aug 28, 2022Updated 3 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 3 years ago
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆75Mar 26, 2026Updated 2 months ago
- A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data☆10Nov 27, 2024Updated last year
- ☆100Apr 22, 2026Updated last month
- Conveniently process a dictionary of anndatas☆23Apr 17, 2026Updated last month