STOmics / ST-GEARSLinks
A Spatial Transcriptomics Geospatial Profile Recovery System Tool through Anchors
☆19Updated 2 months ago
Alternatives and similar repositories for ST-GEARS
Users that are interested in ST-GEARS are comparing it to the libraries listed below
Sorting:
- Flow2Spatial reconstructs spatial proteomics through transfer learning.☆22Updated 5 months ago
- Pytorch implementation of EpiFoundation☆22Updated 7 months ago
- ☆18Updated 5 months ago
- An optimal transport-based algorithm for inferring cell trajectories of spatial transcriptomics.☆31Updated 6 months ago
- Map large-scale single cells to the exact spatial locations☆14Updated 4 months ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆69Updated last year
- Deep learning-based tissue compositions and cell-type-specific gene expression analysis with tissue-adaptive autoencoder (TAPE)☆54Updated last year
- Learning meaningful representations of genes☆19Updated 3 months ago
- ☆13Updated 8 months ago
- Dependency-aware deep generative models for multitasking analysis of spatial genomics data☆36Updated last year
- ☆12Updated last year
- ☆12Updated 8 months ago
- ☆49Updated 7 months ago
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆15Updated last year
- ☆54Updated 10 months ago
- ☆16Updated last month
- Reproducing the experiments of the DestVI paper☆20Updated 3 years ago
- Benchmarking clustering, alignment, and integration methods for spatial transcriptomics☆21Updated 10 months ago
- ☆24Updated 6 months ago
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆39Updated 3 years ago
- ☆61Updated last year
- ☆50Updated last week
- ☆10Updated 2 years ago
- ☆56Updated last year
- single cell analysis of treatment naive and treated human PDAC☆25Updated 3 years ago
- ☆13Updated last year
- ☆24Updated last year
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆60Updated last year
- Graph-based foundation model for spatial transcriptomics data. Zero-shot spatial domain inference, batch-effect correction, and many othe…☆56Updated this week
- StereoMM is a graph fusion model that can integrate gene expression, histological images, and spatial location. And the information inter…☆37Updated 4 months ago