YiLab-SC / scHolographyLinks
☆11Updated last year
Alternatives and similar repositories for scHolography
Users that are interested in scHolography are comparing it to the libraries listed below
Sorting:
- Code for the spatial transcriptomic paper on IPF lungs☆17Updated 10 months ago
- Code related to Shiao, Gouin III, Ing, et al, Cancer Cell 2023.☆11Updated last year
- Scanner of specific spatial patterns in tissues☆13Updated 2 years ago
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆11Updated 3 months ago
- ☆28Updated 3 months ago
- ☆9Updated 10 months ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆25Updated 3 months ago
- ☆18Updated 2 weeks ago
- ☆16Updated last year
- Spatial transcriptomics of heart tissue☆21Updated 2 years ago
- ☆17Updated last year
- ☆15Updated 7 months ago
- ☆13Updated 7 months ago
- ☆12Updated 4 months ago
- CellNeighborEX: Deciphering Neighbor-Dependent Gene Expression from Spatial Transcriptomics Data☆15Updated 10 months ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆14Updated last year
- ☆9Updated 10 months ago
- ☆20Updated last year
- Code for spatial subclone paper☆11Updated 4 months ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆30Updated 2 years ago
- Lung cancer 10X analysis☆11Updated 4 years ago
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Updated 3 months ago
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 3 years ago
- ☆19Updated 2 weeks ago
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆11Updated 8 months ago
- ☆12Updated last year
- Code used to process the data of the HBCA project☆27Updated last year
- Publically accessible code for DIISCO method☆10Updated 7 months ago
- Scripts used to perform the analyses to study the Biology of Myeloid Cells in Glioma Microenvironments☆17Updated 3 weeks ago
- ☆15Updated 2 years ago