Bayesian non-parametric clustering (BnpC) of binary data with missing values and uneven error rates
☆22Jul 11, 2024Updated 2 years ago
Alternatives and similar repositories for BnpC
Users that are interested in BnpC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Map single-cell transcriptomes to copy number evolutionary trees.☆14Aug 18, 2024Updated last year
- LACE 2.0 is a new release of the LACE R Bioconductor package, which provides an interactive user interface to perform clonal evolution an…☆15Apr 7, 2026Updated 3 months ago
- A robust PCA method of tumor clone and evolution inference from single-cell sequencing data.☆12May 28, 2020Updated 6 years ago
- A deme-based, spatially explicit model of intra-tumour population genetics☆21Jan 28, 2025Updated last year
- ☆12May 30, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆25Aug 24, 2025Updated 11 months ago
- Code accompanying "The evolutionary history of 2,658 cancers", Nature 578, 122–128 (2020)☆17Jan 15, 2020Updated 6 years ago
- Supervised Adversarial Alignment of Single-Cell RNA-seq Data☆32Feb 6, 2020Updated 6 years ago
- Tumor Phylogeny Reconstruction via Integrative use of Single Cell and Bulk Sequencing Data☆11Jul 13, 2020Updated 6 years ago
- CHISEL -- Copy-number Haplotype Inference in Single-cell by Evolutionary Links☆44Nov 13, 2024Updated last year
- Single Cell Analysis Automated Workflow☆28May 22, 2023Updated 3 years ago
- Deep exponential families for single-cell data.☆21Jun 17, 2026Updated last month
- LongSom tool for long-reads☆12May 20, 2025Updated last year
- ☆25Mar 3, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆12Apr 13, 2020Updated 6 years ago
- Single-cell copy number calling and event history reconstruction.☆28May 13, 2026Updated 2 months ago
- Data Structures for Bioinformatics - LM Bioinformatics - University of Rome Tor Vergata☆12Feb 27, 2026Updated 4 months ago
- Reproducing the experiments in the paper☆11Dec 14, 2021Updated 4 years ago
- DeepMP is a computational tool to detect DNA modifications in Nanopore sequencing data☆27Mar 18, 2022Updated 4 years ago
- BoostDiff - Inference of differential networks from gene expression data☆13Jan 11, 2024Updated 2 years ago
- Single-cell Iso Prep☆17Oct 28, 2023Updated 2 years ago
- A set of Pyro models and functions to infer CNA from scRNA-seq data☆11Aug 14, 2023Updated 2 years ago
- ☆16May 13, 2022Updated 4 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- HAL (Hybrid Automata Library) is the one-stop shop for all of your hybrid modeling needs☆38Aug 19, 2024Updated last year
- Single-cell Graph Cuts Optimization☆16Apr 27, 2024Updated 2 years ago
- CellCoal: coalescent simulation of single-cell NGS genotypes☆15Feb 10, 2025Updated last year
- 🦀 Tumor growth simulation in C++/R☆20Jun 22, 2026Updated last month
- FISH Iterative Cell Typing☆11Mar 24, 2024Updated 2 years ago
- DeCiFer is an algorithm that simultaneously selects mutation multiplicities and clusters SNVs by their corresponding descendant cell frac…☆22May 21, 2024Updated 2 years ago
- Seamlessly integrate R packages into Python.☆21Apr 12, 2023Updated 3 years ago
- Single-cell COPy number Estimation☆18Dec 11, 2022Updated 3 years ago
- Advanced R 1-day course taught at the University of Cambridge☆11Jul 6, 2018Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆18Jun 3, 2021Updated 5 years ago
- Tertiary analysis package to visualize single-cell data generated by the Tapestri Platform.☆18Jun 29, 2026Updated 3 weeks ago
- ☆21Aug 20, 2024Updated last year
- Git repo for CONIPHER tree building☆27Mar 20, 2025Updated last year
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆36Jan 28, 2022Updated 4 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆45Apr 16, 2021Updated 5 years ago
- Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence☆11Jun 24, 2015Updated 11 years ago