MissionBio / mosaicLinks
Tertiary analysis package to visualize single-cell data generated by the Tapestri Platform.
☆17Updated last month
Alternatives and similar repositories for mosaic
Users that are interested in mosaic are comparing it to the libraries listed below
Sorting:
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆51Updated 2 years ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆55Updated 4 years ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆53Updated 3 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Clone of the Bioconductor repository for the DropletUtils package.☆60Updated last month
- ☆32Updated 6 months ago
- mgatk: mitochondrial genome analysis toolkit☆108Updated 6 months ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆76Updated 5 months ago
- A modular, containerized pipeline for ATAC-seq data processing☆58Updated 2 months ago
- Normalize CITEseq Data☆66Updated 4 months ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆79Updated 3 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- ☆34Updated 6 years ago
- binned motif enrichment analysis and visualisation☆41Updated last week
- R implementation of MULTI-seq sample classification workflow☆64Updated last year
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆54Updated 4 years ago
- SNV calling from single cell sequencing☆104Updated 9 months ago
- A repository of pipelines for single-cell data in Nextflow DSL2☆75Updated 2 years ago
- ☆61Updated 4 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- Tools for single-cell data processing☆126Updated last year
- ☆59Updated 11 months ago
- Processing scripts for single cell DNA sequencing on the Tapestri platform☆24Updated 2 years ago
- ☆55Updated 4 years ago
- A tool that allows to get UMI counts from a single cell protein assay☆82Updated 3 months ago
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆92Updated 3 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆50Updated last year
- Analytical pipeline developed to anlayze Cut and Run data. Inspired by both Henikoff (SEACR) and Orkin (Cut&RunTools) lab pipelines.☆19Updated 2 months ago
- Pipeline for processing inDrops sequencing data☆76Updated 6 years ago