LACE 2.0 is a new release of the LACE R Bioconductor package, which provides an interactive user interface to perform clonal evolution analyses for single-cell sequencing data, including longitudinal experiments. The tool also allows to annotate and retrieve the relevant variants based on user-defined criteria.
☆16Apr 7, 2026Updated 6 months ago
Alternatives and similar repositories for LACE
Users that are interested in LACE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A robust PCA method of tumor clone and evolution inference from single-cell sequencing data.☆12May 28, 2020Updated 6 years ago
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆12Apr 18, 2025Updated last year
- a bioinformatics tool for simulating single-cell genome sequencing data☆10Dec 19, 2019Updated 6 years ago
- Tumor Phylogeny Reconstruction via Integrative use of Single Cell and Bulk Sequencing Data☆11Jul 13, 2020Updated 6 years ago
- Bayesian non-parametric clustering (BnpC) of binary data with missing values and uneven error rates☆23Jul 11, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Elementi di Bioinformatica: Materiale☆14May 24, 2026Updated 5 months ago
- Single-cell copy number calling and event history reconstruction.☆29Sep 3, 2026Updated last month
- Single-cell COPy number Estimation☆18Dec 11, 2022Updated 3 years ago
- Analysies of gene expression data using Gene Ontology☆10Sep 3, 2025Updated last year
- Label elements within user drawn gates☆26Updated this week
- Landscape Single Cell Entropy☆23Aug 24, 2020Updated 6 years ago
- Differential gene expression analysis and pathway analysis of RNAseq data☆31Jul 3, 2025Updated last year
- ☆16May 13, 2022Updated 4 years ago
- Scalable tumor phylogeny inference and validation from single-cell RNA or DNA data☆14Dec 24, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Normalization for single cell RNA-seq data☆11Aug 25, 2022Updated 4 years ago
- A high-performance R package for single-cell genomics☆22Oct 5, 2026Updated 3 weeks ago
- Visualization tool for integrating single cell phylogeny with genomic content to clearly display evolutionary progression and tumour hete…☆11Sep 12, 2017Updated 9 years ago
- Single cell somatic genotyper☆10Sep 28, 2022Updated 4 years ago
- Genetic Heterogeneity Profiling by Single Cell RNA Sequencing☆36May 14, 2020Updated 6 years ago
- Calibrated clustering via knockoffs for single-cell genomics☆11Feb 13, 2025Updated last year
- In-silico doublet annotation for single cell RNA sequencing data☆11Jan 7, 2026Updated 9 months ago
- Bioconductor components for general cancer genomics☆11Feb 5, 2023Updated 3 years ago
- Map single-cell transcriptomes to copy number evolutionary trees.☆14Aug 18, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A scalable method to infer fate specific gene regulatory network from single cell gene expression data☆10Jan 21, 2025Updated last year
- Visualizing transcript structure and annotation using ggplot2☆171Aug 24, 2024Updated 2 years ago
- Data Structures for Bioinformatics - LM Bioinformatics - University of Rome Tor Vergata☆12Updated this week
- scSNV Mapping tool for 10X Single Cell Data☆26Dec 19, 2025Updated 10 months ago
- ☆25Mar 3, 2020Updated 6 years ago
- Single Cell Analysis Automated Workflow☆28May 22, 2023Updated 3 years ago
- Toolkit for single-cell analysis of chromatin accessibility☆13Feb 27, 2020Updated 6 years ago
- A set of Pyro models and functions to infer CNA from scRNA-seq data☆11Aug 14, 2023Updated 3 years ago
- FISH Iterative Cell Typing☆11Mar 24, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆26Aug 24, 2025Updated last year
- ☆17Apr 27, 2023Updated 3 years ago
- rCASC: reproducible Classification Analysis of Single Cell Sequencing Data☆16Apr 15, 2025Updated last year
- ☆18Mar 12, 2021Updated 5 years ago
- CAISC (Clonal Architecture with Integrating SNV and CNV): a software to integrate copy number variation and single nucleotide mutations f…☆14Jul 19, 2021Updated 5 years ago
- a variational autoencoder method for clustering single-cell mutation data☆11Apr 17, 2024Updated 2 years ago
- 🪐 Generate "solar system" plots with {ggplot2}☆23Apr 26, 2023Updated 3 years ago