COMBINE-lab / EDS
A simple, intuitive and Efficient single cell binary Data Storage format
☆15Updated 5 years ago
Alternatives and similar repositories for EDS:
Users that are interested in EDS are comparing it to the libraries listed below
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Code for EpiMap data browser☆14Updated 11 months ago
- A set of tools for accurate quantitation of single-cell allele-specific expression☆12Updated 2 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 7 years ago
- Machine learning use cases for teaching☆13Updated 7 years ago
- kallisto index tag extractor☆20Updated 5 years ago
- ☆19Updated 7 years ago
- ☆13Updated 6 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 9 months ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- Correctly counting molecules using unique molecular identifiers (UMIs)☆9Updated 3 years ago
- R package for benchmarking single cell analysis methods☆31Updated last year
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- Toolkit for QTL mapping and meta-analysis.☆16Updated 2 years ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆17Updated last year
- Differential ATAC-seq toolkit☆27Updated last year
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 3 weeks ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆11Updated 2 years ago
- ☆10Updated 6 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- ☆14Updated 5 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆10Updated 3 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 5 years ago
- ChIP-seq peak calling with GC effects adjustment☆9Updated 6 years ago
- Code for reproducing results from the paper "Modular and efficient pre-processing of single-cell RNA-seq data"☆23Updated 4 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 11 months ago
- Ritornello is a high fidelity control free ChIP-seq peak calling algorithm☆13Updated 6 years ago