COMBINE-lab / EDS
A simple, intuitive and Efficient single cell binary Data Storage format
☆15Updated 5 years ago
Alternatives and similar repositories for EDS:
Users that are interested in EDS are comparing it to the libraries listed below
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Code for EpiMap data browser☆14Updated 10 months ago
- Differential ATAC-seq toolkit☆27Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 8 months ago
- A set of tools for accurate quantitation of single-cell allele-specific expression☆12Updated 2 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated this week
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 7 years ago
- ☆17Updated 11 months ago
- Modeling Spatio-temporal Dynamics of Chromatin Marks☆12Updated 3 years ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆17Updated last year
- Machine learning use cases for teaching☆13Updated 7 years ago
- Pairwise Hierarchical Model☆17Updated 3 years ago
- Correctly counting molecules using unique molecular identifiers (UMIs)☆9Updated 3 years ago
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆13Updated 3 years ago
- ☆10Updated 5 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆10Updated 3 years ago
- ☆13Updated 6 years ago
- kallisto index tag extractor☆20Updated 5 years ago
- Ritornello is a high fidelity control free ChIP-seq peak calling algorithm☆13Updated 6 years ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- Materials presented at the BiocNYC meet-up☆12Updated 6 years ago
- Code for reproducing results from the paper "Modular and efficient pre-processing of single-cell RNA-seq data"☆23Updated 4 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- stageR package☆11Updated 2 years ago
- Toolkit for QTL mapping and meta-analysis.☆16Updated 2 years ago
- ☆19Updated 7 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Updated 2 years ago