cbcrg / tcoffeeLinks
A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence
☆107Updated last week
Alternatives and similar repositories for tcoffee
Users that are interested in tcoffee are comparing it to the libraries listed below
Sorting:
- RNA secondary structure/sequence profiles for homology search and alignment☆114Updated 11 months ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆94Updated 3 years ago
- Fast and flexible ORF finder☆76Updated 3 years ago
- Tools for manipulating biological data, particularly multiple sequence alignments☆158Updated this week
- A console-based alignment viewer☆116Updated 3 months ago
- Sequana: a set of Snakemake NGS pipelines☆146Updated 2 months ago
- sensitive and precise assembly of short sequencing reads☆161Updated last year
- Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.☆61Updated 5 years ago
- Software for aligning viewing and editing dna/aminoacid sequences, intuitive, fast and lightweight. Download and website:☆142Updated 7 months ago
- Catalog of genomic indexes freely available from public clouds☆64Updated last month
- Utilities for building and managing bioconda recipes☆103Updated last month
- Git repository for FASTA36 sequence comparison software☆123Updated 2 months ago
- Simple FASTQ quality assessment using Python☆108Updated 4 years ago
- A BioJS viewer for protein sequence features☆51Updated 2 years ago
- ☆131Updated last year
- Nanopore Plasmid Sequencing☆33Updated 2 years ago
- python access to UCSC genomes database☆136Updated 5 years ago
- deep residual neural network for classifying the pathogenicity of missense mutations.☆115Updated 4 years ago
- Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files☆128Updated 3 years ago
- small RNA analysis from NGS data☆37Updated last year
- G4Hunter (2012_2015)- IECB - Bordeaux☆16Updated 5 years ago
- PAired-eND Assembler for DNA sequences☆137Updated 4 years ago
- ReFramed: metabolic modeling package☆61Updated 3 weeks ago
- Making bioinformatics fun again☆74Updated 4 months ago
- Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files☆116Updated 2 weeks ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆44Updated 9 years ago
- A collection of simple JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. The Sequence Manipu…☆81Updated 10 months ago
- Interactive, web-based BLAST results visualization tool. Accessible at https://kablammo.wasmuthlab.org.☆67Updated 3 years ago
- fast, memory-efficient, pythonic (and command-line) access to fasta sequence files☆88Updated 7 years ago
- A simple command-line tool to download data from Joint Genome Institute databases☆52Updated 2 years ago