cbcrg / tcoffeeLinks
A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence
☆106Updated 3 months ago
Alternatives and similar repositories for tcoffee
Users that are interested in tcoffee are comparing it to the libraries listed below
Sorting:
- RNA secondary structure/sequence profiles for homology search and alignment☆110Updated 6 months ago
- Catalog of genomic indexes freely available from public clouds☆60Updated last month
- ☆129Updated 9 months ago
- sensitive and precise assembly of short sequencing reads☆155Updated 7 months ago
- Software for aligning viewing and editing dna/aminoacid sequences, intuitive, fast and lightweight. Download and website:☆134Updated 2 months ago
- A console-based alignment viewer☆111Updated 3 months ago
- Logan Unitigs and Contigs☆132Updated 3 weeks ago
- Fast and flexible ORF finder☆69Updated 3 years ago
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆61Updated 6 months ago
- Antibiotic resistance prediction in minutes☆108Updated 6 months ago
- Sequana: a set of Snakemake NGS pipelines☆146Updated 3 months ago
- breseq is a computational pipeline for finding mutations relative to a reference sequence in short-read DNA resequencing data. It is inte…☆162Updated this week
- G4Hunter (2012_2015)- IECB - Bordeaux☆13Updated 5 years ago
- Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.☆59Updated 4 years ago
- MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics☆186Updated 10 months ago
- Python programs for processing GFF3 files☆98Updated last year
- ☆33Updated last month
- Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, e…☆246Updated last month
- Download files from NCBI Entrez by accession☆123Updated 9 months ago
- Git repository for FASTA36 sequence comparison software☆121Updated 9 months ago
- Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redunda…☆156Updated 5 months ago
- In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given…☆82Updated 7 years ago
- Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)☆156Updated 8 months ago
- A fast multiple sequence alignment program.☆138Updated last year
- An imagemagick-like frontend to Biopython SeqIO☆115Updated last year
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆105Updated 2 weeks ago
- Find clustered hits from a BLAST search☆114Updated 6 months ago
- A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0☆208Updated this week
- The ARTIC field bioinformatics pipeline☆123Updated 2 weeks ago
- Alignment viewer for linux terminal☆120Updated 2 months ago