lorrainea / MARSLinks
MARS: improving Multiple circular sequence Alignment using Refined Sequences
☆29Updated 2 months ago
Alternatives and similar repositories for MARS
Users that are interested in MARS are comparing it to the libraries listed below
Sorting:
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆58Updated last year
- ⛓ Long Interval Nucleotide K-mer Scaffolder☆74Updated 3 months ago
- 🔗Genome assembly scaffolder using minimizer graphs☆84Updated 9 months ago
- HyPo: Super Fast & Accurate Polisher for Long Read Genome Assemblies☆64Updated 5 years ago
- hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.☆67Updated last week
- PlasmidID is a mapping-based, assembly-assisted plasmid identification tool that analyzes and gives graphic solution for plasmid identifi…☆41Updated 3 years ago
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆52Updated 7 months ago
- Automatically exported from code.google.com/p/prottest3☆37Updated 7 years ago
- PacBio hybrid error correction through iterative short read consensus☆61Updated 6 years ago
- A fork of exonerate: a generic tool for sequence alignment☆67Updated last year
- Reference-guided multiple sequence alignment of viral genomes☆69Updated last month
- ☆27Updated 5 years ago
- FastOMA is a scalable software package to infer orthology relationship.☆77Updated last week
- Detection of incorrectly labeled sequences across kingdoms☆85Updated 2 years ago
- MIRA sequence assembler☆29Updated 6 months ago
- GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison☆59Updated last year
- Error correction for Illumina RNA-seq reads☆67Updated last year
- A local-haplotagging-based small and structural variant caller☆78Updated 2 months ago
- orthology assignment using phylogenetic and network analyses☆45Updated 4 months ago
- A Nextflow pipeline for evaluating assembly quality☆34Updated 2 weeks ago
- A versatile toolkit for k-mers with taxonomic information☆78Updated 11 months ago
- Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, et…☆91Updated last month
- SHOOT.bio - the phylogenetic search engine☆25Updated 2 years ago
- Taxonomic classifier for sequencing reads (bulk and single-cell data, short and long read) using FM-index with run-block compressed BWT.☆60Updated 2 weeks ago
- ☆63Updated last week
- A program for detection of tRNA genes☆63Updated 2 years ago
- perSVade: personalized Structural Variation detection☆40Updated last week
- MAPLE - a new approximate approach for maximum likelihood phylogenetics at short divergence.☆48Updated last month
- ARTIC SARS-CoV-2 workflow and reporting☆50Updated 2 months ago
- VGEA (Viral Genomes Easily Analyzed) is a pipeline for analysis of RNA virus next-generation sequencing data.☆20Updated 3 years ago