TimoLassmann / kalignLinks
A fast multiple sequence alignment program.
☆151Updated 6 months ago
Alternatives and similar repositories for kalign
Users that are interested in kalign are comparing it to the libraries listed below
Sorting:
- Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)☆217Updated last week
- RNA secondary structure/sequence profiles for homology search and alignment☆121Updated last month
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆172Updated last year
- sensitive and precise assembly of short sequencing reads☆163Updated last year
- Logan Unitigs and Contigs☆181Updated 4 months ago
- Cython bindings and Python interface to HMMER3.☆155Updated this week
- nucleic acid folding☆109Updated 5 months ago
- Protein 3D structure prediction pipeline☆95Updated last week
- Discovery of conserved gene clusters in multiple genomes☆121Updated last week
- Protein structure alignment and search algorithm☆77Updated last week
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆85Updated 3 years ago
- Protein structure comparison tools such as SSAP and SNAP☆67Updated 2 years ago
- CCTyper: Automatic detection and subtyping of CRISPR-Cas operons☆106Updated last year
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆92Updated 5 months ago
- BGC Detection and Classification Using Deep Learning☆157Updated 2 years ago
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆159Updated 2 weeks ago
- A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence☆111Updated 3 months ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆38Updated 7 months ago
- ☆133Updated last year
- Webserver and command line tool for annotating engineered plasmids☆136Updated 6 months ago
- An RNA manipulation library.☆56Updated last year
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆77Updated last month
- ReFramed: metabolic modeling package☆62Updated 4 months ago
- UniProt Id Mapping through API☆36Updated 3 months ago
- Similarity networks of biosynthetic gene clusters☆149Updated last week
- Multi-class signal peptide prediction and structure decoding model.☆102Updated 11 months ago
- scripts for predicting natural product activity from biosynthetic gene cluster sequences☆24Updated 4 months ago
- Python bindings for the parasail C library.☆115Updated last year
- A console-based alignment viewer☆117Updated 7 months ago