mpdunne / alanLinks
Alignment viewer for linux terminal
☆120Updated 2 months ago
Alternatives and similar repositories for alan
Users that are interested in alan are comparing it to the libraries listed below
Sorting:
- Download files from NCBI Entrez by accession☆123Updated 9 months ago
- ☆129Updated 9 months ago
- a tool for inferring species tree from sequencing reads☆150Updated 3 months ago
- A console-based alignment viewer☆111Updated 3 months ago
- Fast and flexible ORF finder☆69Updated 3 years ago
- Bioinformatics Tools☆87Updated this week
- Precise phylogenetic analysis of microbial isolates and genomes from metagenomes☆144Updated 2 months ago
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆57Updated 10 months ago
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆94Updated last year
- FunGAP: fungal Genome Annotation Pipeline☆111Updated last year
- A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0☆208Updated this week
- A simple command-line tool to download data from Joint Genome Institute databases☆51Updated 2 years ago
- DDBJ Fast Annotation and Submission Tool☆79Updated last month
- Bioinformatics tool for Locus Visualisation☆106Updated 3 weeks ago
- breseq is a computational pipeline for finding mutations relative to a reference sequence in short-read DNA resequencing data. It is inte…☆162Updated this week
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆105Updated 2 weeks ago
- All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")☆74Updated 2 years ago
- An imagemagick-like frontend to Biopython SeqIO☆115Updated last year
- MGnify genome analysis pipeline☆106Updated last week
- A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category☆66Updated last month
- Similarity networks of biosynthetic gene clusters☆115Updated this week
- Massively parallel phylogenetic placement of genetic sequences☆84Updated 2 years ago
- In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given…☆82Updated 7 years ago
- Pipeline for metabolic annotation of microbial genomes☆147Updated 2 months ago
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆61Updated 6 months ago
- What should perfect bioinformatic tools be like?☆125Updated 3 weeks ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆36Updated 9 months ago
- a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference☆74Updated this week
- RNA secondary structure/sequence profiles for homology search and alignment☆110Updated 6 months ago
- A post sequencing QC tool for Oxford Nanopore sequencers☆97Updated 2 months ago