Alternatives and similar repositories for IntAssoPlot:

Users that are interested in IntAssoPlot are comparing it to the libraries listed below

• Menggg / BLINK
  BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions
  ☆35Updated 3 weeks ago
• YaoLab-Bioinfo / binQTL
  QTL mapping with binmap data
  ☆18Updated 5 years ago
• shuliliu / cattleGTEx
  The cattle Genotype-Tissue Expression atlas v1
  ☆24Updated 2 years ago
• johanzi / gwas_gemma
  Perform GWAS with gemma in a simple pipeline
  ☆25Updated 2 years ago
• YaoLab-Bioinfo / shinyChromosome
  an R/Shiny application for interactive creation of non-circular plots of whole genomes
  ☆45Updated 2 years ago
• guokai8 / CandiHap
  Build haplotye and generate figures
  ☆18Updated 3 years ago
• caulilin / QTG_Seq
  ☆21Updated 6 years ago
• YaoLab-Bioinfo / LIRBase
  A comprehensive collection of long inverted repeats in 424 eukaryotic genomes
  ☆16Updated 3 years ago
• evodify / allele-specific-expression
  Pipeline to perform the allele-specific expression analysis (based on the work by Skelly et al. 2011)
  ☆11Updated 6 years ago
• JialiUMassWengLab / TEMP
  TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…
  ☆22Updated 7 years ago
• moold / Genome-data-of-Hanfu-apple
  FASTA files of chromosomes and genes, gff files for gene models.
  ☆9Updated 6 years ago
• YTLogos / ttplot
  Tao Yan's Plot Toolkit
  ☆11Updated 5 years ago
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 2 weeks ago
• KosukeHamazaki / RAINBOWR
  Reliable Association INference By Optimizing Weights with R (R package for SNP-set GWAS and multi-kernel mixed model)
  ☆22Updated 4 months ago
• ZhaoTingzju / GWAS_script
  Working on cotton resequencing
  ☆11Updated 4 years ago
• xiekunwhy / bsa
  Bulked-Segregant Analysis using vcf file with or without parents
  ☆25Updated 4 months ago
• yingjiexiao / maizeG2P
  ☆12Updated 4 years ago
• georgebusby / admixture_in_africa
  analysis and plotting code for "Admixture into and within Africa" by George Busby et al 2016 (eLife)
  ☆11Updated 8 years ago
• saralpulit / gwas-scripts
  A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…
  ☆20Updated 7 years ago
• sguizard / DensityMap
  DensityMap is perl tool for the visualization of features density along chromosomes
  ☆17Updated 2 years ago
• GaoLei-bio / SV
  ☆14Updated 3 years ago
• Wendellab / CisTransRegulation
  Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum
  ☆16Updated last year
• hemstrow / snpR
  ☆30Updated this week
• filippob / introduction_to_gwas
  https://filippob.github.io/introduction_to_gwas/
  ☆20Updated 9 months ago
• LeanQ / SPLITREADER
  Split-read pipeline for the identification of non-reference TE insertions with TSDs
  ☆25Updated 4 years ago
• mcstitzer / maize_genomic_ecosystem
  ☆11Updated 2 years ago
• xuzhougeng / binmapr
  R package for binmap
  ☆13Updated last year
• biozzq / goat-population-genetic
  Main scripts and commands used to analyze goat population genetic and domestication
  ☆20Updated 6 years ago
• xukaili / CandiHap
  A haplotype analysis toolkit for natural variation study.
  ☆30Updated last year
• Uauy-Lab / WheatHomoeologExpression
  ☆15Updated 4 years ago