whweve / IntAssoPlot
☆15Updated 9 months ago
Related projects ⓘ
Alternatives and complementary repositories for IntAssoPlot
- Build haplotye and generate figures☆17Updated 3 years ago
- Perform GWAS with gemma in a simple pipeline☆25Updated 2 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆32Updated 2 months ago
- A comprehensive collection of long inverted repeats in 424 eukaryotic genomes☆16Updated 3 years ago
- ☆11Updated 2 months ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆21Updated 7 years ago
- The cattle Genotype-Tissue Expression atlas v1☆22Updated last year
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated last year
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 3 weeks ago
- ☆28Updated 2 weeks ago
- https://filippob.github.io/introduction_to_gwas/☆17Updated 4 months ago
- DensityMap is perl tool for the visualization of features density along chromosomes☆17Updated 2 years ago
- Tao Yan's Plot Toolkit☆11Updated 5 years ago
- A haplotype analysis toolkit for natural variation study.☆27Updated last year
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- Efficient compression and retrieve of genotype data with integer sparse matrices☆16Updated last year
- ☆11Updated 2 years ago
- ☆21Updated 5 years ago
- QTL mapping with binmap data☆16Updated 5 years ago
- Pipeline to perform the allele-specific expression analysis (based on the work by Skelly et al. 2011)☆11Updated 5 years ago
- Upscaling SV detection to a multi-population level.☆21Updated 4 years ago
- Manhattan++☆26Updated 9 months ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆16Updated 5 years ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆53Updated 2 weeks ago
- Bulked-Segregant Analysis using vcf file with or without parents☆23Updated 7 months ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆17Updated 11 months ago
- scripts used for processing and analyzing data in the article.☆13Updated 5 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆39Updated 5 years ago
- A tool to plot significant regions of GWAS☆29Updated last year
- ☆24Updated 2 years ago