YaoLab-Bioinfo / LIRBaseLinks
A comprehensive collection of long inverted repeats in 424 eukaryotic genomes
☆16Updated 4 years ago
Alternatives and similar repositories for LIRBase
Users that are interested in LIRBase are comparing it to the libraries listed below
Sorting:
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated 7 months ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 7 months ago
- ☆11Updated 3 years ago
- DensityMap is perl tool for the visualization of features density along chromosomes☆19Updated 3 years ago
- Tao Yan's Plot Toolkit☆12Updated 6 years ago
- Integrative analysis of structural variations.☆40Updated 2 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 9 months ago
- An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions☆14Updated 10 months ago
- ☆15Updated 5 years ago
- A Shiny-based server framework for retrieving, analyzing and visualizing the large genomic variations data in a lab.☆19Updated last year
- A command line tool to compute mapping statistics from a BAM file☆25Updated 3 years ago
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆13Updated last year
- Guangchuang Yu's CV☆43Updated last month
- gghic makes visualization of Hi-C/-like data easily in R☆24Updated this week
- Evolutionary Transcriptomics with R☆47Updated last month
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated 2 years ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 3 years ago
- TQSLE v1.0 released☆10Updated 2 years ago
- BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data.☆12Updated 3 years ago
- ☆18Updated last year
- TF-DNA-binding assay analysis pipeline☆12Updated 5 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- DataColor: Unveiling Biological Data Relationships through Distinctive Color Mapping☆16Updated 2 years ago
- All JBrowse plugins created by Brigitte Hofmeister☆10Updated 7 years ago
- ☆17Updated 6 months ago
- Code for the Brassica oleracea/rapa/napus genomic comparison☆16Updated 4 years ago
- ☆31Updated last week
- ggideogram is a ggplot2 extension package for drawing chromosome diagrams☆17Updated last year
- Efficient compression and retrieve of genotype data with integer sparse matrices☆16Updated 8 months ago
- R package for binmap☆12Updated 2 years ago