YaoLab-Bioinfo / LIRBaseLinks
A comprehensive collection of long inverted repeats in 424 eukaryotic genomes
☆16Updated 3 years ago
Alternatives and similar repositories for LIRBase
Users that are interested in LIRBase are comparing it to the libraries listed below
Sorting:
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 3 weeks ago
- QTL mapping with binmap data☆18Updated 6 years ago
- Tao Yan's Plot Toolkit☆12Updated 5 years ago
- An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions☆13Updated 3 months ago
- Efficient compression and retrieve of genotype data with integer sparse matrices☆16Updated last month
- The knowledge of cloned rice genes lost in the information of rice functional genomics studies☆24Updated last month
- DensityMap is perl tool for the visualization of features density along chromosomes☆17Updated 3 years ago
- A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines☆13Updated 2 years ago
- ☆11Updated 2 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 2 months ago
- Scripts for NGS processing☆17Updated 7 years ago
- A Shiny-based server framework for retrieving, analyzing and visualizing the large genomic variations data in a lab.☆19Updated 7 months ago
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated 2 weeks ago
- ☆17Updated last year
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆17Updated 6 years ago
- Perform GWAS with gemma in a simple pipeline☆26Updated last month
- Split-read pipeline for the identification of non-reference TE insertions with TSDs