Transcripts annotation and GO enrichment Fisher tests
☆27Apr 28, 2023Updated 2 years ago
Alternatives and similar repositories for go_enrichment
Users that are interested in go_enrichment are comparing it to the libraries listed below
Sorting:
- Pipeline for transcriptome de novo assembly☆12Mar 1, 2018Updated 8 years ago
- RADseq workflow using STACKS☆61Mar 11, 2026Updated last week
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Mar 6, 2026Updated 2 weeks ago
- Annotate DNA sequences for Gene Ontology terms☆41Sep 11, 2025Updated 6 months ago
- Genetic Map Comparison☆20Nov 10, 2022Updated 3 years ago
- eDNA metabarcoding pipeline☆43Mar 11, 2026Updated last week
- ☆11Updated this week
- Genome Annotation Without Nightmares☆46Feb 2, 2026Updated last month
- Methylatino phasing using PacBio CCS reads☆14Dec 13, 2024Updated last year
- This python script can be used to detect Whole-genome duplication (WGD) with the dS based method.☆26Feb 22, 2019Updated 7 years ago
- Analysis of co-expression networks from RNA-seq data☆11Apr 6, 2017Updated 8 years ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18Jan 11, 2021Updated 5 years ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Jan 3, 2025Updated last year
- Rank-based Gene Ontology analysis of gene expression data☆43Dec 9, 2022Updated 3 years ago
- De novo annotation of young retrotransposons☆47Apr 12, 2022Updated 3 years ago
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆38Apr 28, 2023Updated 2 years ago
- ☆14Jul 27, 2019Updated 6 years ago
- Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), ad…☆33Jul 12, 2020Updated 5 years ago
- R package for binmap☆12Aug 3, 2023Updated 2 years ago
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 6 years ago
- SINE annotation tool for plant genomes☆19Jan 21, 2024Updated 2 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Mar 19, 2021Updated 5 years ago
- B73Ab10 genome assembly methods☆16Jan 21, 2022Updated 4 years ago
- Bioinformatics scripts for genome analysis☆17Oct 26, 2022Updated 3 years ago
- Collection of various scripts☆80Feb 18, 2026Updated last month
- A set of workflows written in Nextflow for Genome Annotation.☆46Jan 28, 2026Updated last month
- Identification of conserved non-coding sequences in plants☆32Feb 4, 2026Updated last month
- Just Annotate My Genome☆19Sep 17, 2024Updated last year
- Bulked-Segregant Analysis using vcf file with or without parents☆32Dec 20, 2024Updated last year
- Scripts of population genomics analysis☆36May 8, 2018Updated 7 years ago
- convert a multi-sample VCF file to a multiple sequence alignment (C)☆15Feb 15, 2019Updated 7 years ago
- Phylogenetic iDentification of Subgenomes☆10Jul 7, 2022Updated 3 years ago
- ☆12Nov 23, 2020Updated 5 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Jan 30, 2026Updated last month
- read and analyse RepeatMasker output☆27May 22, 2023Updated 2 years ago
- An R package to detect, classify, and visualize genome rearrangements☆15Aug 4, 2020Updated 5 years ago
- A pipeline used to identify different modes of duplicated gene pairs☆119Jul 22, 2025Updated 7 months ago
- My bioinfo toolbox☆50Feb 6, 2025Updated last year
- Crash course for NCBI blast tools☆47Jun 17, 2019Updated 6 years ago