jendelman / diaQTL
QTL analysis in diallel populations
☆11Updated last year
Alternatives and similar repositories for diaQTL:
Users that are interested in diaQTL are comparing it to the libraries listed below
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆36Updated last year
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆28Updated last year
- ☆29Updated this week
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis☆19Updated 2 months ago
- QTL mapping in outcrossing species using CIM☆9Updated last year
- https://filippob.github.io/introduction_to_gwas/☆19Updated 7 months ago
- An R package to compute relationship matrices for diploid and autopolyploid species☆11Updated 2 months ago
- Genetic maps in autopolyploids☆27Updated 10 months ago
- Fast and simple simulation-based population genetic inference in R☆27Updated 3 weeks ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆39Updated 4 months ago
- A smorgasbord of R functions for population genomic analyses☆17Updated 2 months ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 5 years ago
- GWAS software that can handle autopolyploids☆28Updated 3 months ago
- ☆13Updated last year
- ☆12Updated 9 months ago
- Simple and flexible manipulation of genomic data.☆15Updated 7 months ago
- R package to estimate kinship and FST from SNP data☆19Updated 3 months ago
- A textbook on population genetics☆19Updated last month
- An R package for reproducible and automated ADMIXTOOLS analyses☆28Updated 8 months ago
- This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…☆16Updated 3 months ago
- Fitting latent factor mixed models☆12Updated 4 years ago
- A comprehensive collection of long inverted repeats in 424 eukaryotic genomes☆16Updated 3 years ago
- Process MS results in R, in a tidy way☆17Updated 6 years ago
- Tao Yan's Plot Toolkit☆11Updated 5 years ago
- Code and binaries related to processing haplotagging data☆13Updated 2 years ago
- method for modeling continuous and discrete population genetic structure☆35Updated last year
- Suit of R-scripts to perform landscape genomic analyses☆12Updated 4 years ago
- Redundancy Analysis allowing to both estimate the percent of genomic variation explained by each variable as well as to detect the putati…☆8Updated 4 years ago
- The powerful `awk` script to calculate pi, Dxy and Fst in polyploid VCF files with mixed-ploidy groups support☆24Updated last month
- A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines☆13Updated 2 years ago