Alternatives and similar repositories for diaQTL

Users that are interested in diaQTL are comparing it to the libraries listed below

• lvclark / polyRAD
  Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
  ☆31Updated 10 months ago
• hemstrow / snpR
  ☆31Updated last week
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆38Updated 2 years ago
• nicocriscuolo / StructuRly
  Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis
  ☆23Updated last year
• j-a-thia / genomalicious
  A smorgasbord of R functions for performing and teaching population genomic analyses
  ☆19Updated last week
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆43Updated 5 months ago
• mwpennell / geiger-v2
  A suite of methods and models for studying evolutionary radiations
  ☆24Updated 2 years ago
• vsbuffalo / msr
  Process MS results in R, in a tidy way
  ☆16Updated 7 years ago
• StoreyLab / popkin
  R package to estimate kinship and FST from SNP data
  ☆21Updated last week
• filippob / introduction_to_gwas
  https://filippob.github.io/introduction_to_gwas/
  ☆22Updated 6 months ago
• NovembreLab / PCAviz
  An R package to help in plotting PCA results nicely.
  ☆12Updated 5 years ago
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 3 years ago
• YTLogos / ttplot
  Tao Yan's Plot Toolkit
  ☆12Updated 6 years ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆72Updated 3 months ago
• dyerlab / applied_population_genetics
  A textbook on population genetics
  ☆18Updated this week
• kjgilbert / QstFstComp
  R Package for performing Qst-Fst analyses
  ☆21Updated 8 years ago
• rramadeu / AGHmatrix
  An R package to compute relationship matrices for diploid and autopolyploid species
  ☆11Updated 3 weeks ago
• thierrygosselin / radiator
  RADseq Data Exploration, Manipulation and Visualization using R
  ☆59Updated 4 months ago
• bodkan / admixr
  An R interface for the ADMIXTOOLS software
  ☆34Updated last month
• augusto-garcia / fullsibQTL
  QTL mapping in outcrossing species using CIM
  ☆10Updated last year
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆38Updated 2 years ago
• YaoLab-Bioinfo / LIRBase
  A comprehensive collection of long inverted repeats in 424 eukaryotic genomes
  ☆16Updated 4 years ago
• prmunoz / AGHmatrix
  An R package to compute relationship matrices for diploid and autotetraploid species
  ☆21Updated 3 weeks ago
• jgx65 / hierfstat
  the hierfstat package
  ☆25Updated last year
• lamho86 / phylolm
  ☆36Updated last year
• bodkan / slendr
  Population genetic simulations in R
  ☆61Updated 3 weeks ago
• mailund / admixture_graph
  Module for analysing admixture graphs
  ☆29Updated 7 years ago
• jendelman / StageWise
  two-stage analysis of multi-environment trials for genomic selection and GWAS
  ☆28Updated 3 weeks ago
• MesserLab / SLiM-Extras
  Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself
  ☆44Updated 2 months ago
• bodkan / demografr
  A framework for simulation-based inference in evolutionary biology
  ☆28Updated 3 weeks ago