Work with trained factor models in Python
☆41Oct 22, 2024Updated last year
Alternatives and similar repositories for mofax
Users that are interested in mofax are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Multi-omics factor analysis v2☆70Sep 4, 2026Updated last month
- Multi-Omics Factor Analysis☆427Sep 10, 2026Updated last month
- factor models for omics data☆49Oct 5, 2026Updated last week
- muon is a multimodal omics Python framework☆279Oct 6, 2026Updated last week
- A webtool for the clinical interpretation of CNVs in rare disease patients☆14Jun 10, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Molecular interactions inference from single-cell multi-omics data☆33May 7, 2026Updated 5 months ago
- Python tools for proteogenomics analysis toolkit☆19May 23, 2026Updated 4 months ago
- Episcanpy: Epigenomics Single Cell Analysis in Python☆153Dec 5, 2024Updated last year
- Single cell Morphology Quality Control (coSMicQC)☆11Oct 5, 2026Updated last week
- Pixie pipeline described in Liu et al., Robust phenotyping of highly multiplexed tissue imaging data using pixel-level clustering☆14Aug 3, 2023Updated 3 years ago
- Code for the analysis performed in the paper "Deep learning the cis-regulatory code of chromatin dynamics during cellular reprogramming" …☆17Oct 16, 2025Updated 11 months ago
- ☆29Sep 4, 2023Updated 3 years ago
- .h5mu files interface for Seurat☆35Nov 28, 2023Updated 2 years ago
- Python package to perform enrichment analysis from omics data.☆296Oct 5, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆25Jul 9, 2025Updated last year
- ProtGraph - A Graph-Generator for Proteins☆13Sep 7, 2026Updated last month
- Consistent Clusters for scRNA-seq☆12Oct 6, 2021Updated 5 years ago
- Fast array utilities☆15Updated this week
- Single-cell multi-omics integration using Optimal Transport☆55Aug 14, 2025Updated last year
- Sequence data label generation and ingestion into deep learning models☆12Nov 17, 2021Updated 4 years ago
- Gene Expression Decomposition and Integration☆21Feb 9, 2026Updated 8 months ago
- A plugin to visualise 3D spatial single cell omics☆20Oct 22, 2025Updated 11 months ago
- ESTIMATE tumor infiltration, the tidy way☆19Aug 22, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Multi-omic single-cell optimal transport tools☆216Oct 5, 2026Updated last week
- A repository of pipelines for single-cell data in Nextflow DSL2☆81Apr 19, 2023Updated 3 years ago
- Software to infer latent pleiotropic components from GWAS summary data☆17Jan 30, 2025Updated last year
- Negative binomial maximum likelihood estimate implementation in Python using L-BFGS-B☆15Jan 27, 2022Updated 4 years ago
- LoL Esports Voice Analytics Capstone Project☆13Aug 18, 2025Updated last year
- ☆22Feb 26, 2026Updated 7 months ago
- ☆49Jan 28, 2026Updated 8 months ago
- a scalable python suite for tree inference and advanced pseudotime analysis from scRNAseq data.☆73Jul 9, 2026Updated 3 months ago
- PathIntegrate Python package for pathway-based multi-omics data integration☆19Nov 9, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Flexible, scalable, sc molQTL analyses using generalized linear models implemented in JAX☆20Updated this week
- An interface for Nested Stochastic Block Model for single cell analysis☆39Sep 2, 2026Updated last month
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆26Jul 12, 2023Updated 3 years ago
- FISH Iterative Cell Typing☆11Mar 24, 2024Updated 2 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆44Nov 10, 2025Updated 11 months ago
- Build contrasts for models defined with formulaic☆13Oct 5, 2026Updated last week
- Co-accessibility network from single-cell ATAC-seq data. Python code with AnnData, based on Cicero algorithm.☆36May 23, 2026Updated 4 months ago