theislab / moscotLinks
Multi-omic single-cell optimal transport tools
☆174Updated this week
Alternatives and similar repositories for moscot
Users that are interested in moscot are comparing it to the libraries listed below
Sorting:
- Single-cell perturbation analysis☆203Updated last week
- Accelerated, Python-only, single-cell integration benchmarking metrics☆72Updated this week
- Python package to perform enrichment analysis from omics data.☆226Updated this week
- Supervised Pathway DEConvolution of InTerpretable Gene ProgRAms☆175Updated last year
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆148Updated 7 months ago
- Multimodal Data (.h5mu) implementation for Python☆97Updated 4 months ago
- CZ CELLxGENE Discover Census☆109Updated last week
- A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to repr…☆218Updated 3 months ago
- Formalizing and benchmarking open problems in single-cell genomics☆57Updated 3 months ago
- Models and datasets for perturbational single-cell omics☆164Updated 3 years ago
- ☆84Updated last year
- Learning cell communication from spatial graphs of cells☆113Updated last year
- Unsupervised Deep Disentangled Representation of Single-Cell Omics☆51Updated last week
- 🎼 Integrate multiple high-dimensional datasets with fuzzy k-means and locally linear adjustments.☆234Updated last year
- Batch balanced KNN☆171Updated last year
- Episcanpy: Epigenomics Single Cell Analysis in Python☆147Updated 10 months ago
- Multi-omic velocity inference