Python toolbox for multi-omics data mapping and analysis
☆29Apr 13, 2023Updated 3 years ago
Alternatives and similar repositories for pyMultiOmics
Users that are interested in pyMultiOmics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Single sample pathway analysis tools for omics data☆15Nov 9, 2024Updated last year
- Single cell Morphology Quality Control (coSMicQC)☆11Aug 3, 2026Updated 3 weeks ago
- Metagenomic AnalySis with QUantitative pipEline☆12Apr 24, 2019Updated 7 years ago
- Reconstruction of spatial context of gene expression with optimal transport☆11Mar 14, 2019Updated 7 years ago
- The NCBI SARS-CoV-2 Variant Calling (SC2VC) Pipeline allows calling high-confidence variants from SARS-CoV-2 NGS data in a standardized f…☆14Apr 21, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The nPYc-Toolbox defines objects for representing, and implements functions to manipulate and display, metabolic profiling datasets.☆25Jul 23, 2026Updated last month
- 🦠🧬 Unraveling Viral Genomes from Metagenomes☆11Jul 30, 2026Updated last month
- Multi-omics module that includes RNAseq, Epigenetics, and integrated multi-omics analyses developed as part of the NIGMS Sandbox project☆15Jun 6, 2025Updated last year
- Python library for large-scale targeted metabolomics.☆23Jul 24, 2026Updated last month
- A curated list of awesome Molecular Modeling And Drug Discovery 🔥☆11Jul 21, 2022Updated 4 years ago
- FELLA: an R package for Metabolomics data enrichment through diffusion☆25Jan 23, 2026Updated 7 months ago
- ViBE: a hierarchical BERT model to identify viruses using metagenome sequencing data☆11Sep 6, 2022Updated 3 years ago
- ☆12Jan 31, 2023Updated 3 years ago
- A flexible Julia toolkit for high-dimensional cellular profiles☆13Jul 14, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆10Aug 29, 2012Updated 14 years ago
- VirusScan Pipeline☆12Feb 7, 2026Updated 6 months ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Feb 11, 2022Updated 4 years ago
- Monorepo for the Open Targets Platform — a data integration tool for systematic drug target identification and prioritisation☆11Updated this week
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆11Jun 28, 2018Updated 8 years ago
- Work with trained factor models in Python☆41Oct 22, 2024Updated last year
- MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations☆99Updated this week
- Small pipeline to cluster viral genomes based on their k-mer content. WiP☆21Jul 3, 2026Updated last month
- Source code and data files for "PEMT: A patent enrichment tool with applicability in drug discovery"☆17Jan 27, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- BioLearns: Computational Biology and Bioinformatics Toolbox in Python☆12Oct 12, 2022Updated 3 years ago
- viralComplete: BLAST-based viral completeness verification☆23Oct 4, 2021Updated 4 years ago
- ☆19Jan 16, 2024Updated 2 years ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆14Jan 20, 2022Updated 4 years ago
- First place algorithm in ISBI 2024 Light My Cell competition, label-free cell painting☆14Jun 3, 2024Updated 2 years ago
- ☆13Jul 23, 2026Updated last month
- A pipeline for comprehensive genomic analyses of Mycobacterium tuberculosis with a focus on clinical decision making as well as research☆19Aug 10, 2026Updated 3 weeks ago
- A command-line interface and python module for R's GSVA bioconductor package☆14Jul 8, 2018Updated 8 years ago
- Some sleuth walkthroughs to help you get started☆10Jul 26, 2018Updated 8 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A scalable python-based framework for gene regulatory network inference using tree-based ensemble regressors.☆70Apr 5, 2024Updated 2 years ago
- Toy files and training material to introduce Linux to molecular biologists☆22Jul 21, 2023Updated 3 years ago
- Creating animations with the python's library Manim☆13Apr 22, 2022Updated 4 years ago
- Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation☆16Apr 29, 2025Updated last year
- Code used for mouse single cell RNAseq testis atlas☆12Nov 28, 2020Updated 5 years ago
- A simple pipeline for bacterial assembly and quality control☆17Updated this week
- Scripts associated with the 2023 Open Problems competition☆10Nov 23, 2023Updated 2 years ago