scverse / muon-tutorials
Tutorials for multimodal omics data analysis
☆14Updated 2 months ago
Alternatives and similar repositories for muon-tutorials
Users that are interested in muon-tutorials are comparing it to the libraries listed below
Sorting:
- Gene group activity utility functions for Scanpy☆74Updated 4 months ago
- A unified interface to spatial transcriptomics deconvolution tools☆41Updated last week
- RA Synovial Single-cell Multimodal Cell Atlas☆14Updated last year
- Spatial direct messaging detected by bivariate Moran☆26Updated last week
- Reproducibility notebooks for scPoli☆17Updated 2 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆42Updated last year
- Multimodal weakly supervised learning to identify disease-specific changes in single-cell atlases☆31Updated 3 weeks ago
- Materials and scripts for building cell type encyclopedia table☆19Updated 4 months ago
- ☆54Updated last year
- Analyzing cellular niches in spatial transcriptomics data☆29Updated 5 months ago
- Hotspot cluster distance analysis in spatial transcriptomic data☆26Updated 3 months ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 2 months ago
- ☆58Updated 8 months ago
- ☆27Updated 2 months ago
- .h5mu files interface for Seurat☆29Updated last year
- ☆42Updated last year
- Multi-modal single cell analysis pipelines☆57Updated 2 weeks ago
- CAST package☆34Updated 6 months ago
- ☆19Updated 3 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 4 years ago
- Cell-type Relationship Analysis Workflow Done Across Distances☆31Updated 2 months ago
- ☆36Updated 7 months ago
- ☆51Updated 11 months ago
- iterative clustering pipeline of big single cell datasets.☆31Updated last week
- A modular tool for proportion analysis in single-cell sequencing data☆19Updated 3 months ago
- ☆43Updated 6 months ago
- ☆16Updated 10 months ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆34Updated 2 months ago
- ☆13Updated last month
- Python package for Probe set selection for targeted spatial transcriptomics.☆36Updated 5 months ago