scverse / muon-tutorialsLinks
Tutorials for multimodal omics data analysis
☆18Updated 9 months ago
Alternatives and similar repositories for muon-tutorials
Users that are interested in muon-tutorials are comparing it to the libraries listed below
Sorting:
- Multi-modal single cell analysis pipelines☆61Updated last month
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆71Updated 2 years ago
- ☆61Updated last year
- ACTIONet single-cell analysis framework☆44Updated last year
- ☆17Updated last year
- cTPnet Package☆27Updated 3 years ago
- ☆26Updated 6 months ago
- Matilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-m…☆22Updated 6 months ago
- Materials and scripts for building cell type encyclopedia table☆20Updated last week
- Reproducing result from the paper☆34Updated 4 years ago
- ☆44Updated last year
- Python package for integrating and analyzing multiple single-cell datasets (A Python version of LIGER)☆30Updated 6 months ago
- scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics☆41Updated 3 years ago
- ☆56Updated last year
- Gene group activity utility functions for Scanpy☆97Updated 11 months ago
- Work with trained factor models in Python☆36Updated last year
- ☆50Updated 9 months ago
- Single cell omics biology annotations☆50Updated 7 months ago
- ☆56Updated last year
- Unsupervised cell functional annotation for single-cell RNA-Seq☆22Updated 2 years ago
- Analyzing cellular niches in spatial transcriptomics data☆33Updated last year
- repository containing analysis scripts and auxiliary files☆36Updated 5 years ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆66Updated 5 months ago
- BESCA (Beyond Single Cell Analysis) offers python functions for single-cell analysis☆50Updated 6 months ago
- ☆15Updated 3 years ago
- Generative adversarial networks for single-cell RNA-seq imputation☆39Updated 5 years ago
- Spatially-resolved Transcriptomics via Epitope Anchoring☆19Updated last year
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 3 months ago
- Collection of scripts for analysis of pan fetal immune atlas☆28Updated 3 years ago
- ☆58Updated last year