collection of mass spectrometry imaging workflows
☆22Mar 17, 2026Updated 3 weeks ago
Alternatives and similar repositories for msiflow
Users that are interested in msiflow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Mass spectrometry imaging applications for interactive analysis in MITK (M²aia)☆21Mar 14, 2026Updated last month
- A python package for protein inference in Mass Spectrometric data analysis.☆10Jun 6, 2022Updated 3 years ago
- MAss spectra alignment tool for MSI data☆20Jun 6, 2022Updated 3 years ago
- An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics☆19Oct 2, 2025Updated 6 months ago
- Mass spectrometry imaging toolbox☆71Apr 6, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Next generation of SuRVoS☆10Oct 11, 2023Updated 2 years ago
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆23May 22, 2025Updated 10 months ago
- Linking napari layers with Matplotlib plots☆43Apr 2, 2026Updated last week
- ☆46Mar 14, 2025Updated last year
- Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…☆41Updated this week
- FISH Iterative Cell Typing☆11Mar 24, 2024Updated 2 years ago
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆53Jun 6, 2024Updated last year
- ☆18Aug 9, 2019Updated 6 years ago
- rMSI processing methods using C++☆11Dec 3, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- QC systems for metabolomics studies☆11Sep 17, 2025Updated 6 months ago
- ☆22Jun 28, 2021Updated 4 years ago
- MS/MS prediction for peptides☆24Dec 18, 2020Updated 5 years ago
- StarDist plugin for ImageJ☆30May 9, 2022Updated 3 years ago
- Cloud engine and platform for metabolite annotation for imaging mass spectrometry☆57Updated this week
- An open-source Python package to unify raw MS data accession and storage.☆31Updated this week
- Qt utilities to enable hot-reloading of python/Qt code☆12Updated this week
- INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration☆12Jun 30, 2021Updated 4 years ago
- Evaluating batch correction methods for image-based cell profiling☆15Aug 11, 2025Updated 8 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30May 1, 2025Updated 11 months ago
- Whole slide image registration through wsireg in napari.☆12Apr 21, 2023Updated 2 years ago
- ImageJ/Fiji plugin to skeletonize binary images☆19Jun 14, 2022Updated 3 years ago
- A Framework for IMS-MS Raw Data Processing written in Rust and Python.☆19Updated this week
- ImageJ plugin suite for image feature extraction☆10Dec 17, 2015Updated 10 years ago
- Public release of Monoqlo Python code☆10Apr 19, 2022Updated 3 years ago
- Using Biological Signals for Mass Recalibration of Mass Spectrometry Imaging Data☆11Dec 10, 2021Updated 4 years ago
- Python implementation of MATLAB's msalign function☆11Mar 26, 2026Updated 2 weeks ago
- Ngio is a Python library to streamline OME-Zarr image analysis workflows.☆48Apr 7, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆18Apr 5, 2024Updated 2 years ago
- MethodsJ2☆14May 6, 2022Updated 3 years ago
- Your Personal Assistant in Computational Bioimaging.☆45Mar 28, 2025Updated last year
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated last year
- CloudReg☆11Apr 5, 2024Updated 2 years ago
- ☆13Jul 7, 2021Updated 4 years ago
- An ImageJ/FIJI plugin for multi-channel Hyperstack alignment (registration)☆13Dec 7, 2022Updated 3 years ago