Alternatives and similar repositories for sodar-server

Users that are interested in sodar-server are comparing it to the libraries listed below

• raulossio / VCF-plotein
  Visualisation and prioritisation of genomic variants from human exome sequencing projects
  ☆13Updated 6 years ago
• abbvie-external / OmicNavigator
  Open-Source Software for Omic Data Analysis and Visualization
  ☆40Updated this week
• UCLouvain-CBIO / WSBIM1322
  Bioinformatics course (WSBIM1322)
  ☆17Updated 3 weeks ago
• yigbt / multiGSEA
  The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.
  ☆20Updated last month
• AlexsLemonade / scpca-nf
  scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data
  ☆13Updated last week
• marcos-diazg / musica
  MuSiCa - Mutational Signatures in Cancer
  ☆23Updated last year
• ericminikel / genetic_support
  Refining the impact of genetic evidence on clinical success
  ☆27Updated last year
• fomightez / sequencework
  programs and scripts, mainly python, for analyses related to nucleic or protein sequences
  ☆24Updated last month
• research-software-ecosystem / content
  A metadata commons to store research software metadata
  ☆44Updated last week
• pachterlab / BBB
  Bioinformatics for Benched Biologists
  ☆22Updated 5 years ago
• datarail / gr_metrics
  ☆15Updated 2 years ago
• vals / python-gprofiler
  ☆12Updated 6 years ago
• NIH-HPC / snakemake-class
  Class materials for the NIH HPC snakemake class
  ☆15Updated last year
• slowkow / hlabud
  🐶 hlabud: HLA genotype analysis in R
  ☆17Updated 8 months ago
• davismcc / workshop-scRNAseq-oxford-sep2016
  scRNA-seq workshop in Oxford on 9 September 2016
  ☆11Updated 9 years ago
• Oshlack / Slinker
  Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.
  ☆19Updated 3 years ago
• salbrec / seqQscorer
  ☆22Updated 2 months ago
• gengit / FRAMA
  FRAMA: From RNA-seq data to annotated mRNA assemblies
  ☆12Updated 7 years ago
• kuijjerlab / PySNAIL
  Smooth-quantile Normalization Adaptation for Inference of co-expression Links
  ☆16Updated 2 years ago
• elyadlezmi / RNA2CM
  Pipeline for the identification of cancer-related mutations from RNA-seq data
  ☆14Updated 4 years ago
• slowkow / cellguide
  🧭 Navigate single-cell RNA-seq datasets in your web browser.
  ☆29Updated 2 years ago
• saezlab / ShinyFUNKI
  FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…
  ☆14Updated 3 years ago
• statgen / fivex
  Interactive eQTL visualizations
  ☆13Updated 2 years ago
• AbbVie-ComputationalGenomics / genetic-evidence-approval
  ☆26Updated 4 years ago
• ewels / Labrador
  A web based tool to manage and automate the processing of publicly available datasets.
  ☆39Updated 4 years ago
• 7ravis / hgvs-regexp
  WIP : regular expressions for identifying and extracting values from HGVS nomenclature
  ☆14Updated 7 years ago
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆52Updated last week
• bionitio-team / bionitio-python
  Demonstrating best practices for bioinformatics command line tools
  ☆26Updated 5 years ago
• DeveauP / QuantumClone
  Clonal reconstruction from HTS data
  ☆10Updated 4 years ago
• AlexsLemonade / OpenScPCA-analysis
  An open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portal
  ☆14Updated last week