SODAR: System for Omics Data Access and Retrieval
☆22Jul 8, 2026Updated this week
Alternatives and similar repositories for sodar-server
Users that are interested in sodar-server are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers.☆21Jun 11, 2026Updated 3 weeks ago
- ☆14Feb 17, 2022Updated 4 years ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆20Dec 20, 2023Updated 2 years ago
- S3-compatible storage resource plugin for iRODS☆12Jun 22, 2026Updated 2 weeks ago
- Search the biomedical literature for protein interactions and protein associations☆11Nov 24, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Python API for iRODS☆71Jun 3, 2026Updated last month
- Microarray Analysis Pipeline in Python☆19Aug 1, 2019Updated 6 years ago
- functions and algorithms for single cell RNA-seq analyses☆11Jan 26, 2021Updated 5 years ago
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆11Jun 28, 2018Updated 8 years ago
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆19Aug 9, 2023Updated 2 years ago
- SeqOthello supports fast coverage query and containment query.☆12May 8, 2019Updated 7 years ago
- Python package to load and query ARCHS4 data☆28Jul 25, 2025Updated 11 months ago
- 🪐 - Lightweight Dataverse interface in Python to upload, download and update datasets found in Dataverse installations.☆29Nov 27, 2025Updated 7 months ago
- Python bindings for Open-MS framework☆13Feb 21, 2013Updated 13 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.☆60Updated this week
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆13May 1, 2023Updated 3 years ago
- Biomark Fluidigm qPCR data set: processing and analysis☆10Apr 8, 2024Updated 2 years ago
- Scripts☆10Jun 29, 2016Updated 10 years ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆12Jun 17, 2024Updated 2 years ago
- xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, …☆39Feb 6, 2026Updated 5 months ago
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆15Feb 27, 2019Updated 7 years ago
- Parse BAM and BAM index files in javascript for node and the browser☆26Jul 1, 2026Updated last week
- Shiny app for visualization, exploration of mouse brain single cell gene expression☆12Oct 31, 2018Updated 7 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- The shiny app that accompanies the ngsReports R package☆14Jun 10, 2021Updated 5 years ago
- ☆12May 22, 2024Updated 2 years ago
- Facemash is a website created by Mark Zuckerberg in 2003, where people had to choose between two photos. This is clone of facemash in the…☆10Feb 13, 2017Updated 9 years ago
- RNA velocity validation☆22Mar 16, 2022Updated 4 years ago
- Website about the project WorkflowHub☆13Updated this week
- Quantify and interpret divers of variation in multilevel gene expression experiments☆16Mar 19, 2026Updated 3 months ago
- Faultless AST for Open Biomedical Ontologies in Python.☆33Feb 2, 2026Updated 5 months ago
- A simple cv template written in LaTex☆12Aug 14, 2021Updated 4 years ago
- satMiner: A Toolkit to NGS satellite DNA mining and analysis☆12Mar 10, 2022Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Phenotype detection in pooled genetic perturbation screens☆12Mar 13, 2024Updated 2 years ago
- Comprehensive Human Expressed SequenceS☆19Jul 13, 2025Updated 11 months ago
- This repository contains code for the AOP-Wiki XML-to-RDF conversion and guidance to deploy a Virtuoso SPARQL endpoint Docker image that …☆12Updated this week
- ☆21Jul 6, 2023Updated 3 years ago
- An explanatory Python project template using pip-conflict-checker for dependency management☆11Sep 22, 2015Updated 10 years ago
- ☆11Dec 8, 2022Updated 3 years ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆35Jul 27, 2023Updated 2 years ago